Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20virguliforme_20[genbank_20GCA_5F001680605.1_202016-07-06]
25,286 sequences; 50,152,336 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq7620 331 7e-86
seq4896 181 8e-41
>seq7620
Length=2775
Score = 331 bits (366), Expect = 7e-86
Identities = 1220/1874 (65%), Gaps = 54/1874 (3%)
Strand=Plus/Plus
Query 65084 GTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTCTTGAGG 65143
|||| ||||| | | ||| || |||| || | || ||||||||||| ||||| |||
Sbjct 5 GTGACCTGGAGGGGAGCAGCGGCAGCCTGCGTTCGCAGGTAGTACATGCCCGTCTTCAGG 64
Query 65144 CCAGCACGCCAAGCATAGAAA-TGCATCGATGATAATTTTGCATAAT-TCGGCTCGGCCA 65201
|| | | | ||| ||| ||||| | || | || |||| | | || || ||
Sbjct 65 CC-GAGCTTCCAGCCGGCAAAGTGCAT-GCTGGTGATCTTGCCCATGGTGGGGTCCTTCA 122
Query 65202 CATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCATGTCAA 65261
|| || || | ||||| |||||| ||| | ||| || || |||||||| | ||
Sbjct 123 TGTGGATGTTGAGGGACTGGGACTGATCAATGAAGGCACCTCGGTCGGCAGCCATCTGAA 182
Query 65262 TGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGT-ACCTCAATTGGA 65320
|| | || ||| |||||||||||||||||||| ||| | | | ||||| ||
Sbjct 183 CGACCTGGCGCTGCGAAATCTCCCAGACGGTCTTGTAGAGG-GCCTTGACCTCGGCGGGG 241
Query 65321 ATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCATCGACTCT 65380
|| | |||| ||||| ||||| ||||| || || || ||| | ||
Sbjct 242 ATGTTGGGGATGTTCTGGATGGAACCGTTCTCGGCAATGATTCGGTTTTTCATGGCATCC 301
Query 65381 GACCACAAACCCAAATCGATAAGATG-TTGAACCAAGTGACGA-TTGATGACTTGGAACT 65438
||||||| |||| || | ||| | |||| | || | | |||| ||| |||||||
Sbjct 302 GACCACAGGCCCATGTCAACAAGGTCCTTGAGC--AGCCAGGGGTTGACGACCTGGAACT 359
Query 65439 CGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATTCAGTGT 65498
|||| | || ||||| || ||||||||||| ||| || || ||| | || |||
Sbjct 360 CGCCAGCGAGGACACGGCGCTGGTAGATGTTGGAGGTGTAAGGCTCGAAGCACTCGTTGT 419
Query 65499 TGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTTTCGCA 65558
|||| || || || | |||| ||||| ||||| || || | || || ||| || |
Sbjct 420 TGCCCAGGATCTGCGAAGTACTGGCAGTAGGCATAGGGGCAAGCAGCAGACTGTTGCGAA 479
Query 65559 ATCCGT--TCATTTCAATGTTG--TGACGCAATTCGTCCCAGTTCCACATCGGTTTATCG 65614
|||| || || || | ||| | ||| ||||||| ||| | | | | |
Sbjct 480 TGCCGTGCTCCTTGACCTGCTCCCTGAGG---TTC-TCCCAGTCCCAGA---GGTCA--G 530
Query 65615 TCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAACCGAGG 65674
| | || || |||||| || || || | || | ||| || || || |
Sbjct 531 AAGGCTTC-ACATTCCACATGTCGAACTGGAGAATACCCTCAGAGGCGGGAGAGCCCTTG 589
Query 65675 AAACTATCGTACACTCCCTCCTCCTTGGCAAGTTG-ACAGCTGGTCTCGAGTGCGGCAAA 65733
|| | ||| |||||||||||||| || || || | | | ||| || |||
Sbjct 590 AAGGTGGAGTAGGGACCCTCCTCCTTGGCCAGCTGCACCGAAGCAGT-GAGGGCAGCATG 648
Query 65734 ATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTACGGCAT 65793
|| ||||||||||| || | || || ||||| ||||| |||| | |||||
Sbjct 649 GTAGATGGTCTCGAAGATCTGCTTGTTGAGCTCACGAGCCTCGGGAGACTCGAAAGGCAT 708
Query 65794 ACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGACG 65853
| || | |||| || || ||||| || || |||| ||| ||||| || || ||
Sbjct 709 GCGCAGAGCAAGGAAAGCATCAGCAAGACCCTGGACACCAACACCAATGGGTCGGTGTCG 768
Query 65854 CAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGATTCAA 65913
|| ||| | || || | |||||||||| || | |||||||| | ||||
Sbjct 769 CATGTTGCTGTTGCGAGCTTCCGTAACAGGGTAGTGGTTCACGTCGATAATCCTGTTCAG 828
Query 65914 ATTGCGTGTCACCACATGCACGATACGTCG--CAATTGTTCGAAATCAAAATGTTTAGGA 65971
||||| || || || || ||||| ||| | | ||| ||| | || |
Sbjct 829 GTTGCGAACGACAACCTGTGTGA--CGTCGTGCAACTTCTGGAAGTCATAGCA---AGCA 883
Query 65972 CGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACA 66031
|||| ||| || || || || ||||| ||||| || ||||||||||||
Sbjct 884 TCATCGT-AGTTGATGA----ACGAA----GGCAGGGCCAGAGAAGCAAGGTTGCAGACA 934
Query 66032 GCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATG 66091
|| | ||| ||||| ||| ||||||| ||| |||||||| ||||| || || |||
Sbjct 935 GCAACCTCATCAGGGGCGCAGTACTCGATAATCTCGGTGCAGAGATTGGAGCTACGGATG 994
Query 66092 GTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGA 66151
||||||| |||| || || |||||||| ||||| |||||||| | |||| | ||
Sbjct 995 GTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTAGAGCATGAAGGGG 1054
Query 66152 GTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGTA 66211
|||||||||| || | ||| | |||||| | ||| || | ||||||| ||
Sbjct 1055 TTGCCGGTCTCGGTCTGCGCCTCGAGGATGGCATACCAGAGCTTCTGGGCCTTCATGGT- 1113
Query 66212 CGTACCGCCCTACCTTTGCGT-TCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCA 66270
| | | |||| | | | || || | |||||| || ||||| | | | |||
Sbjct 1114 CTTGCGACCCTTGCCCGCCTTCTCATACTTTTCGTAAAGAGCCTCGAAC--TCCTCGCCA 1171
Query 66271 TACT--TCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATCCTGT 66328
|| |||| ||||| || |||| || |||||||| || | ||| ||||| | ||
Sbjct 1172 TAGCAGTCGGCCAGACCGGGGCACTCGTTGGGACACATGAGGGTCCAGTCACCGTTCTTC 1231
Query 66329 TCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGT 66388
|| ||||| ||| || ||||| || |||||||| || ||| || ||||| || ||
Sbjct 1232 TCGACACGCTTCATGAAGAGATCGGGAATCCAGAGAGCCAGGAACAGGTCGCGGGCGCGG 1291
Query 66389 TGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCAT 66448
|||||| ||||||| || ||||||| ||| ||||||||||||| || || |||||
Sbjct 1292 ACCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCAAGGAACTCAAAGACATCTGCGTGCCAG 1351
Query 66449 GGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGA 66508
|| || ||||||||||| || | || || ||| |||||| ||||||||||| ||
Sbjct 1352 GGCTCAAGGTAGATGGCAAAGGCACCAGGTCGCTTGTTGCCACCCTGGTCGACGTACCGG 1411
Query 66509 GCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCG 66568
|| |||||||||||||| | ||| || || ||||| || | || ||||| ||
Sbjct 1412 GCAGTGTTGTTGAAGACACGAAGCATGGGGGTGACACCGTTGGAGGTACCGTTGGTACCA 1471
Query 66569 TCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTC 66628
||||| || || || || || ||| || ||||| || |||||||| ||| ||
Sbjct 1472 GCGATGTAAGAGCCAGTGGCACGGATTCGGTGGACGTTCAGGCCGATACCACCCGCCATC 1531
Query 66629 TTCGAGATGGCAGCACA-ATC-GGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCT 66686
|| ||||| ||||| || | | | || |||| || |||||| ||| | |
Sbjct 1532 TTGGAGATCATGGCACAGGTCTTGAGAGTATCATAAATA--CCCTCAATGCTGTCCTCTT 1589
Query 66687 TGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGG 66746
| ||| | ||| ||||||| || || || | ||| || | || ||||||||
Sbjct 1590 TCATGTCGACCAGGAAGCATGAGGACAGCTGAGGCTGGGGAGTACCAGCATTGAAGAGGG 1649
Query 66747 TGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCAT 66806
|||| | || || || ||| | | || ||||| ||||| ||||| | |||| |
Sbjct 1650 TGGGGGAGGCATGGGTGAAGAATTTGCTCGACATCAGGTTGTAGGTCTCCAGGACACGCT 1709
Query 66807 CAATGTTTTCGCCATGAATCCCGAGTG-CACATCGCATCAGGAGGTATTGAGGCCGTTCG 66865
|||| | || || || |||| | |||| ||||| | | || || || || ||
Sbjct 1710 CAATATCGTCACCCCAGATGCCGACAGACACA-CGCATGATCATGTGCTGGGGACGCTCA 1768
Query 66866 ACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAAAGTAC 66925
|| | | | | || | | | |||||| || || || ||||||| |||||||||
Sbjct 1769 ACAATCTTGCCATCAATCTTGAGGAGGTAGGATCGCTCAAGAGTCTTGAAGCCAAAGTAC 1828
Query 66926 GAGTAATTGAAATC 66939
||| | ||| ||
Sbjct 1829 TGGTATTGGAAGTC 1842
>seq4896
Length=3982
Score = 181 bits (200), Expect = 8e-41
Identities = 560/855 (65%), Gaps = 20/855 (2%)
Strand=Plus/Minus
Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146
|| |||| |||||||| ||||| || || || |||||||| | |||||| | ||| |
Sbjct 1996 ATCTGGCAGATGTACAAGAAGGCCGAGGCCTCTTTCTGGACTGCCGAGGAGATTGATCTA 1937
Query 61147 TCCAAAGACATGAATGACTGGGAG---CGTTTATCGAGCGGTGAACAACATTTCATTAAA 61203
||||| || | | |||||| | || | | || || || ||| |
Sbjct 1936 TCCAAGGATCTCCACGACTGGAACAACCGCCTGACTGCCGACGAGCAGTTCTTCGTCTCC 1877
Query 61204 CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGT 61263
|| | | || ||||| || || || ||||| |||||||| ||||| | | || ||
Sbjct 1876 CACATCCTCGCCTTCTTCGCTGCCTCTGACGGCATCGTCAACGAGAACCTTGTCGAGCGA 1817
Query 61264 TTCGCGCAG-GAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCAT 61322
||| || | ||||| || | | ||||| || || ||||||||||||||||| ||
Sbjct 1816 TTCA-GCGGCGAGGTCCAGATCCCCGAGGCCCGATGCTTCTACGGCTTCCAGATCATGAT 1758
Query 61323 GGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGC 61382
|||||| ||||||| |||| ||| | ||||| || || ||||||| ||||| ||
Sbjct 1757 GGAGAACATCCACTCCGAGACCTACTCGCTCCTCATTGACACCTACATCAAGGAGCCAGC 1698
Query 61383 GGAACGTGAACGA-TTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCG---GAAAG 61438
|||| | | | | ||||| ||||| ||||| || || | || | || ||| |
Sbjct 1697 TCAACG-AACCTACCTCTTCAACGCCATTGAGACCATCCC--CTGT-ATCCGCAAGAAGG 1642
Query 61439 CGGATTGGGCCTTCAATTGGATCACCAGTACAACGGCT--ACATTTGGTGAACGATTGCT 61496
| || |||||| || ||||| |||| |||| || | |||| | | || | |
Sbjct 1641 CCGACTGGGCCATCCGATGGAT--CCAGGACAAGAACTCGTCCTTTGCTCAGCGTCTCGT 1584
Query 61497 GGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTT 61556
|| ||||| | ||||||||| | || ||||| || | |||||| | ||||| ||| |
Sbjct 1583 CGCCTTTGCTGCCGTCGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCCATCTTCTGGCT 1524
Query 61557 GAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGA 61616
||||| ||||| || ||||| || |||||||| ||| ||| | || || || |||||
Sbjct 1523 CAAGAAGCGTGGCCTCATGCCTGGCCTGACCTTTTCCAACGAGCTCATCTCTCGTGACGA 1464
Query 61617 GGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTC 61676
||| | || || ||||| | || || | | | || | ||| |
Sbjct 1463 GGGTCTTCACACCGACTTTGC---ATGCCTCCTCCACTCCCACCTCAAGGGCCGTGCCAG 1407
Query 61677 GGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGAC 61736
|| || | || || | || || || || || || ||||| || |||||
Sbjct 1406 CAAGCAGGTCATCCAGGACATCATCACCGATGCCGTCACCATTGAGCAGGAGTTCCTGAC 1347
Query 61737 TGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGA 61796
|| || | ||| | | || |||||||||| | || ||| |||||| || ||
Sbjct 1346 CGAGGCCCTCCCCTGCGCCCTGCTCGGCATGAACGCCGACCTCATGAAGCAGTACATCGA 1287
Query 61797 ATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAA 61856
|| || |||||||| || | |||| | || | || | |||| || | | ||
Sbjct 1286 GTTCGTCGCCGACCGCCTCCTCGTCGCCCTCGGCAACGAGAAGGTCTACAAGGCCACCAA 1227
Query 61857 CCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACG 61916
||| || || |||||||| | || || || | ||||||||| || || |||||||| ||
Sbjct 1226 CCCCTTCGACTTCATGGAGAACATCTCCCTCGGTGGCAAGACCAACTTCTTCGAGAAGCG 1167
Query 61917 TGTAGGCGACTATCA 61931
||| || ||||| ||
Sbjct 1166 TGTCGGTGACTACCA 1152
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397445480227040
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