Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20virguliforme_20[genbank_20GCA_5F001680605.1_202016-07-06] 25,286 sequences; 50,152,336 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq7620 331 7e-86 seq4896 181 8e-41 >seq7620 Length=2775 Score = 331 bits (366), Expect = 7e-86 Identities = 1220/1874 (65%), Gaps = 54/1874 (3%) Strand=Plus/Plus Query 65084 GTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTCTTGAGG 65143 |||| ||||| | | ||| || |||| || | || ||||||||||| ||||| ||| Sbjct 5 GTGACCTGGAGGGGAGCAGCGGCAGCCTGCGTTCGCAGGTAGTACATGCCCGTCTTCAGG 64 Query 65144 CCAGCACGCCAAGCATAGAAA-TGCATCGATGATAATTTTGCATAAT-TCGGCTCGGCCA 65201 || | | | ||| ||| ||||| | || | || |||| | | || || || Sbjct 65 CC-GAGCTTCCAGCCGGCAAAGTGCAT-GCTGGTGATCTTGCCCATGGTGGGGTCCTTCA 122 Query 65202 CATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCATGTCAA 65261 || || || | ||||| |||||| ||| | ||| || || |||||||| | || Sbjct 123 TGTGGATGTTGAGGGACTGGGACTGATCAATGAAGGCACCTCGGTCGGCAGCCATCTGAA 182 Query 65262 TGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGT-ACCTCAATTGGA 65320 || | || ||| |||||||||||||||||||| ||| | | | ||||| || Sbjct 183 CGACCTGGCGCTGCGAAATCTCCCAGACGGTCTTGTAGAGG-GCCTTGACCTCGGCGGGG 241 Query 65321 ATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCATCGACTCT 65380 || | |||| ||||| ||||| ||||| || || || ||| | || Sbjct 242 ATGTTGGGGATGTTCTGGATGGAACCGTTCTCGGCAATGATTCGGTTTTTCATGGCATCC 301 Query 65381 GACCACAAACCCAAATCGATAAGATG-TTGAACCAAGTGACGA-TTGATGACTTGGAACT 65438 ||||||| |||| || | ||| | |||| | || | | |||| ||| ||||||| Sbjct 302 GACCACAGGCCCATGTCAACAAGGTCCTTGAGC--AGCCAGGGGTTGACGACCTGGAACT 359 Query 65439 CGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATTCAGTGT 65498 |||| | || ||||| || ||||||||||| ||| || || ||| | || ||| Sbjct 360 CGCCAGCGAGGACACGGCGCTGGTAGATGTTGGAGGTGTAAGGCTCGAAGCACTCGTTGT 419 Query 65499 TGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTTTCGCA 65558 |||| || || || | |||| ||||| ||||| || || | || || ||| || | Sbjct 420 TGCCCAGGATCTGCGAAGTACTGGCAGTAGGCATAGGGGCAAGCAGCAGACTGTTGCGAA 479 Query 65559 ATCCGT--TCATTTCAATGTTG--TGACGCAATTCGTCCCAGTTCCACATCGGTTTATCG 65614 |||| || || || | ||| | ||| ||||||| ||| | | | | | Sbjct 480 TGCCGTGCTCCTTGACCTGCTCCCTGAGG---TTC-TCCCAGTCCCAGA---GGTCA--G 530 Query 65615 TCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAACCGAGG 65674 | | || || |||||| || || || | || | ||| || || || | Sbjct 531 AAGGCTTC-ACATTCCACATGTCGAACTGGAGAATACCCTCAGAGGCGGGAGAGCCCTTG 589 Query 65675 AAACTATCGTACACTCCCTCCTCCTTGGCAAGTTG-ACAGCTGGTCTCGAGTGCGGCAAA 65733 || | ||| |||||||||||||| || || || | | | ||| || ||| Sbjct 590 AAGGTGGAGTAGGGACCCTCCTCCTTGGCCAGCTGCACCGAAGCAGT-GAGGGCAGCATG 648 Query 65734 ATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTACGGCAT 65793 || ||||||||||| || | || || ||||| ||||| |||| | ||||| Sbjct 649 GTAGATGGTCTCGAAGATCTGCTTGTTGAGCTCACGAGCCTCGGGAGACTCGAAAGGCAT 708 Query 65794 ACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGACG 65853 | || | |||| || || ||||| || || |||| ||| ||||| || || || Sbjct 709 GCGCAGAGCAAGGAAAGCATCAGCAAGACCCTGGACACCAACACCAATGGGTCGGTGTCG 768 Query 65854 CAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGATTCAA 65913 || ||| | || || | |||||||||| || | |||||||| | |||| Sbjct 769 CATGTTGCTGTTGCGAGCTTCCGTAACAGGGTAGTGGTTCACGTCGATAATCCTGTTCAG 828 Query 65914 ATTGCGTGTCACCACATGCACGATACGTCG--CAATTGTTCGAAATCAAAATGTTTAGGA 65971 ||||| || || || || ||||| ||| | | ||| ||| | || | Sbjct 829 GTTGCGAACGACAACCTGTGTGA--CGTCGTGCAACTTCTGGAAGTCATAGCA---AGCA 883 Query 65972 CGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACA 66031 |||| ||| || || || || ||||| ||||| || |||||||||||| Sbjct 884 TCATCGT-AGTTGATGA----ACGAA----GGCAGGGCCAGAGAAGCAAGGTTGCAGACA 934 Query 66032 GCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATG 66091 || | ||| ||||| ||| ||||||| ||| |||||||| ||||| || || ||| Sbjct 935 GCAACCTCATCAGGGGCGCAGTACTCGATAATCTCGGTGCAGAGATTGGAGCTACGGATG 994 Query 66092 GTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGA 66151 ||||||| |||| || || |||||||| ||||| |||||||| | |||| | || Sbjct 995 GTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTAGAGCATGAAGGGG 1054 Query 66152 GTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGTA 66211 |||||||||| || | ||| | |||||| | ||| || | ||||||| || Sbjct 1055 TTGCCGGTCTCGGTCTGCGCCTCGAGGATGGCATACCAGAGCTTCTGGGCCTTCATGGT- 1113 Query 66212 CGTACCGCCCTACCTTTGCGT-TCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCA 66270 | | | |||| | | | || || | |||||| || ||||| | | | ||| Sbjct 1114 CTTGCGACCCTTGCCCGCCTTCTCATACTTTTCGTAAAGAGCCTCGAAC--TCCTCGCCA 1171 Query 66271 TACT--TCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATCCTGT 66328 || |||| ||||| || |||| || |||||||| || | ||| ||||| | || Sbjct 1172 TAGCAGTCGGCCAGACCGGGGCACTCGTTGGGACACATGAGGGTCCAGTCACCGTTCTTC 1231 Query 66329 TCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGT 66388 || ||||| ||| || ||||| || |||||||| || ||| || ||||| || || Sbjct 1232 TCGACACGCTTCATGAAGAGATCGGGAATCCAGAGAGCCAGGAACAGGTCGCGGGCGCGG 1291 Query 66389 TGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCAT 66448 |||||| ||||||| || ||||||| ||| ||||||||||||| || || ||||| Sbjct 1292 ACCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCAAGGAACTCAAAGACATCTGCGTGCCAG 1351 Query 66449 GGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGA 66508 || || ||||||||||| || | || || ||| |||||| ||||||||||| || Sbjct 1352 GGCTCAAGGTAGATGGCAAAGGCACCAGGTCGCTTGTTGCCACCCTGGTCGACGTACCGG 1411 Query 66509 GCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCG 66568 || |||||||||||||| | ||| || || ||||| || | || ||||| || Sbjct 1412 GCAGTGTTGTTGAAGACACGAAGCATGGGGGTGACACCGTTGGAGGTACCGTTGGTACCA 1471 Query 66569 TCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTC 66628 ||||| || || || || || ||| || ||||| || |||||||| ||| || Sbjct 1472 GCGATGTAAGAGCCAGTGGCACGGATTCGGTGGACGTTCAGGCCGATACCACCCGCCATC 1531 Query 66629 TTCGAGATGGCAGCACA-ATC-GGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCT 66686 || ||||| ||||| || | | | || |||| || |||||| ||| | | Sbjct 1532 TTGGAGATCATGGCACAGGTCTTGAGAGTATCATAAATA--CCCTCAATGCTGTCCTCTT 1589 Query 66687 TGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGG 66746 | ||| | ||| ||||||| || || || | ||| || | || |||||||| Sbjct 1590 TCATGTCGACCAGGAAGCATGAGGACAGCTGAGGCTGGGGAGTACCAGCATTGAAGAGGG 1649 Query 66747 TGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCAT 66806 |||| | || || || ||| | | || ||||| ||||| ||||| | |||| | Sbjct 1650 TGGGGGAGGCATGGGTGAAGAATTTGCTCGACATCAGGTTGTAGGTCTCCAGGACACGCT 1709 Query 66807 CAATGTTTTCGCCATGAATCCCGAGTG-CACATCGCATCAGGAGGTATTGAGGCCGTTCG 66865 |||| | || || || |||| | |||| ||||| | | || || || || || Sbjct 1710 CAATATCGTCACCCCAGATGCCGACAGACACA-CGCATGATCATGTGCTGGGGACGCTCA 1768 Query 66866 ACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAAAGTAC 66925 || | | | | || | | | |||||| || || || ||||||| ||||||||| Sbjct 1769 ACAATCTTGCCATCAATCTTGAGGAGGTAGGATCGCTCAAGAGTCTTGAAGCCAAAGTAC 1828 Query 66926 GAGTAATTGAAATC 66939 ||| | ||| || Sbjct 1829 TGGTATTGGAAGTC 1842 >seq4896 Length=3982 Score = 181 bits (200), Expect = 8e-41 Identities = 560/855 (65%), Gaps = 20/855 (2%) Strand=Plus/Minus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| ||||| || || || |||||||| | |||||| | ||| | Sbjct 1996 ATCTGGCAGATGTACAAGAAGGCCGAGGCCTCTTTCTGGACTGCCGAGGAGATTGATCTA 1937 Query 61147 TCCAAAGACATGAATGACTGGGAG---CGTTTATCGAGCGGTGAACAACATTTCATTAAA 61203 ||||| || | | |||||| | || | | || || || ||| | Sbjct 1936 TCCAAGGATCTCCACGACTGGAACAACCGCCTGACTGCCGACGAGCAGTTCTTCGTCTCC 1877 Query 61204 CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGT 61263 || | | || ||||| || || || ||||| |||||||| ||||| | | || || Sbjct 1876 CACATCCTCGCCTTCTTCGCTGCCTCTGACGGCATCGTCAACGAGAACCTTGTCGAGCGA 1817 Query 61264 TTCGCGCAG-GAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCAT 61322 ||| || | ||||| || | | ||||| || || ||||||||||||||||| || Sbjct 1816 TTCA-GCGGCGAGGTCCAGATCCCCGAGGCCCGATGCTTCTACGGCTTCCAGATCATGAT 1758 Query 61323 GGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGC 61382 |||||| ||||||| |||| ||| | ||||| || || ||||||| ||||| || Sbjct 1757 GGAGAACATCCACTCCGAGACCTACTCGCTCCTCATTGACACCTACATCAAGGAGCCAGC 1698 Query 61383 GGAACGTGAACGA-TTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCG---GAAAG 61438 |||| | | | | ||||| ||||| ||||| || || | || | || ||| | Sbjct 1697 TCAACG-AACCTACCTCTTCAACGCCATTGAGACCATCCC--CTGT-ATCCGCAAGAAGG 1642 Query 61439 CGGATTGGGCCTTCAATTGGATCACCAGTACAACGGCT--ACATTTGGTGAACGATTGCT 61496 | || |||||| || ||||| |||| |||| || | |||| | | || | | Sbjct 1641 CCGACTGGGCCATCCGATGGAT--CCAGGACAAGAACTCGTCCTTTGCTCAGCGTCTCGT 1584 Query 61497 GGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTT 61556 || ||||| | ||||||||| | || ||||| || | |||||| | ||||| ||| | Sbjct 1583 CGCCTTTGCTGCCGTCGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCCATCTTCTGGCT 1524 Query 61557 GAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGA 61616 ||||| ||||| || ||||| || |||||||| ||| ||| | || || || ||||| Sbjct 1523 CAAGAAGCGTGGCCTCATGCCTGGCCTGACCTTTTCCAACGAGCTCATCTCTCGTGACGA 1464 Query 61617 GGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTC 61676 ||| | || || ||||| | || || | | | || | ||| | Sbjct 1463 GGGTCTTCACACCGACTTTGC---ATGCCTCCTCCACTCCCACCTCAAGGGCCGTGCCAG 1407 Query 61677 GGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGAC 61736 || || | || || | || || || || || || ||||| || ||||| Sbjct 1406 CAAGCAGGTCATCCAGGACATCATCACCGATGCCGTCACCATTGAGCAGGAGTTCCTGAC 1347 Query 61737 TGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGA 61796 || || | ||| | | || |||||||||| | || ||| |||||| || || Sbjct 1346 CGAGGCCCTCCCCTGCGCCCTGCTCGGCATGAACGCCGACCTCATGAAGCAGTACATCGA 1287 Query 61797 ATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAA 61856 || || |||||||| || | |||| | || | || | |||| || | | || Sbjct 1286 GTTCGTCGCCGACCGCCTCCTCGTCGCCCTCGGCAACGAGAAGGTCTACAAGGCCACCAA 1227 Query 61857 CCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACG 61916 ||| || || |||||||| | || || || | ||||||||| || || |||||||| || Sbjct 1226 CCCCTTCGACTTCATGGAGAACATCTCCCTCGGTGGCAAGACCAACTTCTTCGAGAAGCG 1167 Query 61917 TGTAGGCGACTATCA 61931 ||| || ||||| || Sbjct 1166 TGTCGGTGACTACCA 1152 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397445480227040