Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20virguliforme_20[genbank_20GCA_5F001680665.1_202016-07-06] 25,997 sequences; 50,938,851 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq2 367 2e-99 seq22474 131 3e-28 >seq2 Length=6014 Score = 367 bits (406), Expect = 2e-99 Identities = 239/259 (92%), Gaps = 3/259 (1%) Strand=Plus/Minus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3096 TACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 3037 Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120 ||||||||||||||||||||||||| |||| || ||| |||||||||||||||||||||| Sbjct 3036 ACCTGTTATTGCCTCAAACTTCCATCGGCTTGA-GCCGATAGTCCCTCTAAGAAGCCAGC 2978 Query 121 CACCAACCATAGTCGATG-GGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179 | ||| || | || |||||||||||||||||||||||||||||||||||| |||| Sbjct 2977 GTACTGCCAAAG-CAATACGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAATT 2919 Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239 || ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct 2918 AAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAG 2859 Query 240 AAAGAGCTATCAATCTGTC 258 |||||||| |||||||||| Sbjct 2858 AAAGAGCTCTCAATCTGTC 2840 >seq22474 Length=215 Score = 131 bits (144), Expect = 3e-28 Identities = 77/80 (96%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 145 TTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACT 204 ||| |||||||||||||||||||||||||| |||||| |||||||||||||||||||||| Sbjct 80 TTTGGCAGGTTAAGGTCTCGTTCGTTATCGCAATTAAGCAGACAAATCACTCCACCAACT 21 Query 205 AAGAACGGCCATGCACCACC 224 |||||||||||||||||||| Sbjct 20 AAGAACGGCCATGCACCACC 1 Score = 123 bits (136), Expect = 4e-26 Identities = 71/73 (97%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 139 GGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCA 198 |||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| Sbjct 88 GGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAATTAAGCAGACAAATCACTCCA 147 Query 199 CCAACTAAGAACG 211 ||||||||||||| Sbjct 148 CCAACTAAGAACG 160 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796599329157