Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20virguliforme_20[genbank_20GCA_5F001680665.1_202016-07-06] 25,997 sequences; 50,938,851 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq16 497 2e-138 seq938 131 3e-28 seq23665 116 6e-24 >seq16 Length=2124 Score = 497 bits (550), Expect = 2e-138 Identities = 288/295 (98%), Gaps = 1/295 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 |||||||| |||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct 1221 TACTAAGCTGAATTACCATTGCGGCGA-GGTCATCAGTAGGGTAAAACTAACCTGTCTCA 1163 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1162 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 1103 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 1102 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTAT 1043 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1042 GAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 983 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 982 CAAATGTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 928 >seq938 Length=7672 Score = 131 bits (144), Expect = 3e-28 Identities = 84/91 (92%), Gaps = 2/91 (2%) Strand=Plus/Plus Query 207 ATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGA--GGGACTAAAGGATC 264 |||||||||||||||||||||||||||||||||||| || ||| |||||||||||||| Sbjct 1620 ATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAGATGTCGCCGGGGACTAAAGGATC 1679 Query 265 GATAGGCCACACTTTCATGGTTTGTATTCAC 295 |||| |||||||||||||||||| ||||||| Sbjct 1680 GATAAGCCACACTTTCATGGTTTATATTCAC 1710 >seq23665 Length=200 Score = 116 bits (128), Expect = 6e-24 Identities = 71/74 (96%), Gaps = 1/74 (1%) Strand=Plus/Plus Query 19 TTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGC 78 ||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 120 TTGCGGCGA-GGTCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGC 178 Query 79 TCACGTTCCCTATT 92 |||||||||||||| Sbjct 179 TCACGTTCCCTATT 192 Score = 104 bits (114), Expect = 4e-20 Identities = 67/72 (93%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 |||||||| |||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct 87 TACTAAGCTGAATTACCATTGCGGCGA-GGTCATCAGTAGGGTAAAACTAACCTGTCTCA 29 Query 61 TGACGGTCTAAA 72 |||||||| || Sbjct 28 CGACGGTCTCAA 17 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854177881632