Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20virguliforme_20[genbank_20GCA_5F001680665.1_202016-07-06]
25,997 sequences; 50,938,851 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq16 623 3e-176
seq25647 190 7e-46
seq97 178 4e-42
seq9991 93.3 1e-16
>seq16
Length=2124
Score = 623 bits (690), Expect = 3e-176
Identities = 400/435 (92%), Gaps = 5/435 (1%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 896 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACACCTGCGTTATG 837
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct 836 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGGTC 777
Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186
||||||||||||||||||| |||||| ||| || || |||| ||||||||||||
Sbjct 776 GGCCCGCGAAGGACCTTAAAACCAGAAGTTGGACGA--AAATCCAGCCCCGCTTCATTGA 719
Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246
||||||||||||| ||| | ||||||||||||||| |||||||| |||||||| ||
Sbjct 718 ATAAGTAAAAAAACAATAGGAGTAGTGGTATTTCACCGGCGCCGAA---GCTCCCACCTA 662
Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTC 306
||||||||||| | ||| |||||||| ||| |||||||||||||||||||||||||||
Sbjct 661 TTCTACACCTCCTATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCTTC 602
Query 307 TTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 366
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 601 TTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 542
Query 367 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 541 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 482
Query 427 TGGCTACCTTAAGAG 441
|||||||||||||||
Sbjct 481 TGGCTACCTTAAGAG 467
Score = 136 bits (150), Expect = 1e-29
Identities = 77/78 (99%), Gaps = 0/78 (0%)
Strand=Plus/Minus
Query 441 GAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTC 500
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 79 GAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTACTTCACTTTGACATTC 20
Query 501 AGAGCACTGGGCAGAAAT 518
||||||||||||||||||
Sbjct 19 AGAGCACTGGGCAGAAAT 2
>seq25647
Length=245
Score = 190 bits (210), Expect = 7e-46
Identities = 114/117 (97%), Gaps = 2/117 (2%)
Strand=Plus/Plus
Query 304 TTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAG 363
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 13 TTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAG 72
Query 364 ATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCA-CTAATTAGATGACG 419
|||||||||||||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct 73 ATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCATCTAATTAG-TGACG 128
Score = 168 bits (186), Expect = 2e-39
Identities = 93/93 (100%), Gaps = 0/93 (0%)
Strand=Plus/Minus
Query 327 AGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTT 386
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 202 AGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTT 143
Query 387 AATCCATTCATGCGCGTCACTAATTAGATGACG 419
|||||||||||||||||||||||||||||||||
Sbjct 142 AATCCATTCATGCGCGTCACTAATTAGATGACG 110
Score = 84.2 bits (92), Expect = 7e-14
Identities = 46/46 (100%), Gaps = 0/46 (0%)
Strand=Plus/Plus
Query 352 GCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCAT 397
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 200 GCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCAT 245
>seq97
Length=450
Score = 178 bits (196), Expect = 4e-42
Identities = 101/103 (98%), Gaps = 0/103 (0%)
Strand=Plus/Plus
Query 441 GAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTC 500
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 66 GAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTACTTCACTTTGACATTC 125
Query 501 AGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543
||||||||||||||||||||||||||||||||| |||||||||
Sbjct 126 AGAGCACTGGGCAGAAATCACATTGCGTCAACACCACTTTCTG 168
>seq9991
Length=1401
Score = 93.3 bits (102), Expect = 1e-16
Identities = 76/92 (83%), Gaps = 4/92 (4%)
Strand=Plus/Minus
Query 6 TCTTTTGCTCTACA----GGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCG 61
||||||| |||||| | |||||||||||||| |||| |||| ||||||||||||||
Sbjct 729 TCTTTTGTTCTACATATGGAAGATTTCTGTTCTCGATGAACCCCCTTTAGGACACCTGCG 670
Query 62 TTATGGTTTAACAGATGTGCCGCCCCAGCCAA 93
|||| |||| | |||| | ||||||||||||
Sbjct 669 TTATAGTTTGATAGATTTATCGCCCCAGCCAA 638
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1634774897056
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |