Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20virguliforme_20[genbank_20GCA_5F001680665.1_202016-07-06]
25,997 sequences; 50,938,851 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq4116 327 9e-85
seq2597 181 8e-41
>seq4116
Length=4278
Score = 327 bits (362), Expect = 9e-85
Identities = 1209/1857 (65%), Gaps = 54/1857 (3%)
Strand=Plus/Minus
Query 65101 AGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTCTTGAGGCCAGCACGCCAAGCATA 65160
||| || |||| || | || ||||||||||| ||||| ||||| | | | |||
Sbjct 4266 AGCGGCAGCCTGCGTTCGCAGGTAGTACATGCCCGTCTTCAGGCC-GAGCTTCCAGCCGG 4208
Query 65161 GAAA-TGCATCGATGATAATTTTGCATAAT-TCGGCTCGGCCACATGCATATTCAACGAC 65218
||| ||||| | || | || |||| | | || || || || || || | |||
Sbjct 4207 CAAAGTGCAT-GCTGGTGATCTTGCCCATGGTGGGGTCCTTCATGTGGATGTTGAGGGAC 4149
Query 65219 TGACTCTGATCGATGTAACGACCACGATCTGCAGCCATGTCAATGATACGACGTCCCGAT 65278
|| |||||| ||| | ||| || || |||||||| | || || | || |||
Sbjct 4148 TGGGACTGATCAATGAAGGCACCTCGGTCGGCAGCCATCTGAACGACCTGGCGCTGCGAA 4089
Query 65279 ATCTCCCAGACGGTCTTGTACAGGCGACGT-ACCTCAATTGGAATCTCCTCAATGTCCTG 65337
|||||||||||||||||||| ||| | | | ||||| || || | |||| |||
Sbjct 4088 ATCTCCCAGACGGTCTTGTAGAGG-GCCTTGACCTCGGCGGGGATGTTGGGGATGTTCTG 4030
Query 65338 GACTGAACCACGACGTGCAATAATGCGATTACGCATCGACTCTGACCACAAACCCAAATC 65397
|| ||||| ||||| || || || ||| | || ||||||| |||| ||
Sbjct 4029 GATGGAACCGTTCTCGGCAATGATTCGGTTTTTCATGGCATCCGACCACAGGCCCATGTC 3970
Query 65398 GATAAGATG-TTGAACCAAGTGACGA-TTGATGACTTGGAACTCGCCGGACAGTACACGA 65455
| ||| | |||| | || | | |||| ||| ||||||||||| | || |||||
Sbjct 3969 AACAAGGTCCTTGAGC--AGCCAGGGGTTGACGACCTGGAACTCGCCAGCGAGGACACGG 3912
Query 65456 CGGACATAGATGTTGGACGTGATGGGTTCAAAGGATTCAGTGTTGCCTAGAATTTGGGCA 65515
|| ||||||||||| ||| || || ||| | || ||||||| || || || | |
Sbjct 3911 CGCTGGTAGATGTTGGAGGTGTAAGGCTCGAAGCACTCGTTGTTGCCCAGGATCTGCGAA 3852
Query 65516 GTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTTTCGCAATCCGT--TCATTTCAA 65573
||| ||||| ||||| || || | || || ||| || | |||| || ||
Sbjct 3851 GTACTGGCAGTAGGCATAGGGGCAAGCAGCAGACTGTTGCGAATGCCGTGCTCCTTGACC 3792
Query 65574 TGTTG--TGACGCAATTCGTCCCAGTTCCACATCGGTTTATCGTCGACATCCACGGGCCA 65631
|| | ||| | ||| ||||||| ||| | | | | | | | || || |||
Sbjct 3791 TGCTCCCTGAGG---TTC-TCCCAGTCCCAGA---GGTCA--GAAGGCTTC-ACATTCCA 3742
Query 65632 CATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAACCGAGGAAACTATCGTACACTCC 65691
||| || || || | || | ||| || || || ||| | ||| ||
Sbjct 3741 CATGTCGAACTGGAGAATACCCTCAGAGGCGGGAGAGCCCTTGAAGGTGGAGTAGGGACC 3682
Query 65692 CTCCTCCTTGGCAAGTTG-ACAGCTGGTCTCGAGTGCGGCAAAATAAATGGTCTCGAAAA 65750
|||||||||||| || || || | | | ||| || ||| || ||||||||||| |
Sbjct 3681 CTCCTCCTTGGCCAGCTGCACCGAAGCAGT-GAGGGCAGCATGGTAGATGGTCTCGAAGA 3623
Query 65751 TGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTACGGCATACCCATCAGGACAAAAG 65810
| | || || ||||| ||||| |||| | ||||| | || | ||||
Sbjct 3622 TCTGCTTGTTGAGCTCACGAGCCTCGGGAGACTCGAAAGGCATGCGCAGAGCAAGGAAAG 3563
Query 65811 TGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGACGCAAATTGGAACGTCTCG 65870
|| || ||||| || || |||| ||| ||||| || || |||| ||| | |
Sbjct 3562 CATCAGCAAGACCCTGGACACCAACACCAATGGGTCGGTGTCGCATGTTGCTGTTGCGAG 3503
Query 65871 CCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGATTCAAATTGCGTGTCACCACAT 65930
| || | |||||||||| || | |||||||| | |||| ||||| || || |
Sbjct 3502 CTTCCGTAACAGGGTAGTGGTTCACGTCGATAATCCTGTTCAGGTTGCGAACGACAACCT 3443
Query 65931 GCACGATACGTCG--CAATTGTTCGAAATCAAAATGTTTAGGACGATCGGGAGTGCCGGA 65988
| || ||||| ||| | | ||| ||| | || | |||| ||| ||
Sbjct 3442 GTGTGA--CGTCGTGCAACTTCTGGAAGTCATAGCA---AGCATCATCGT-AGTTGATGA 3389
Query 65989 CACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGC 66048
|| || || ||||| ||||| || |||||||||||||| | ||| ||||| ||
Sbjct 3388 ----ACGAA----GGCAGGGCCAGAGAAGCAAGGTTGCAGACAGCAACCTCATCAGGGGC 3337
Query 66049 GGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTG 66108
| ||||||| ||| |||||||| ||||| || || |||||||||| |||| ||
Sbjct 3336 GCAGTACTCGATAATCTCGGTGCAGAGATTGGAGCTACGGATGGTGCCCAGGTTCTTCTG 3277
Query 66109 ATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTG 66168
|| |||||||| ||||| |||||||| | |||| | || |||||||||| ||
Sbjct 3276 GTTGCTCTTGCGGTTGCAGTGGTCCTTGTAGAGCATGAAGGGGTTGCCGGTCTCGGTCTG 3217
Query 66169 GGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTACCTTT 66228
| ||| | |||||| | ||| || | ||||||| || | | | |||| |
Sbjct 3216 CGCCTCGAGGATGGCATACCAGAGCTTCTGGGCCTTCATGGT-CTTGCGACCCTTGCCCG 3158
Query 66229 GCGT-TCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACT--TCGGACAGACA 66285
| | || || | |||||| || ||||| | | | ||||| |||| |||||
Sbjct 3157 CCTTCTCATACTTTTCGTAAAGAGCCTCGAAC--TCCTCGCCATAGCAGTCGGCCAGACC 3100
Query 66286 TGGACACTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAA 66345
|| |||| || |||||||| || | ||| ||||| | || || ||||| ||| ||
Sbjct 3099 GGGGCACTCGTTGGGACACATGAGGGTCCAGTCACCGTTCTTCTCGACACGCTTCATGAA 3040
Query 66346 TAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTG 66405
||||| || |||||||| || ||| || ||||| || || |||||| |||||||
Sbjct 3039 GAGATCGGGAATCCAGAGAGCCAGGAACAGGTCGCGGGCGCGGACCTCCTCCTTGCCGTG 2980
Query 66406 ATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGC 66465
|| ||||||| ||| ||||||||||||| || || ||||| || || |||||||||||
Sbjct 2979 GTTCTTGCGCAGGTCAAGGAACTCAAAGACATCTGCGTGCCAGGGCTCAAGGTAGATGGC 2920
Query 66466 GAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGAC 66525
|| | || || ||| |||||| ||||||||||| || || |||||||||||
Sbjct 2919 AAAGGCACCAGGTCGCTTGTTGCCACCCTGGTCGACGTACCGGGCAGTGTTGTTGAAGAC 2860
Query 66526 ACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCG 66585
||| | ||| || || ||||| || | || ||||| || ||||| || ||
Sbjct 2859 ACGAAGCATGGGGGTGACACCGTTGGAGGTACCGTTGGTACCAGCGATGTAAGAGCCAGT 2800
Query 66586 TGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACA 66645
|| || || ||| || ||||| || |||||||| ||| |||| ||||| |||||
Sbjct 2799 GGCACGGATTCGGTGGACGTTCAGGCCGATACCACCCGCCATCTTGGAGATCATGGCACA 2740
Query 66646 -ATC-GGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAG 66703
|| | | | || |||| || |||||| ||| | || ||| | ||| ||
Sbjct 2739 GGTCTTGAGAGTATCATAAATA--CCCTCAATGCTGTCCTCTTTCATGTCGACCAGGAAG 2682
Query 66704 CATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTA 66763
||||| || || || | ||| || | || |||||||||||| | || || ||
Sbjct 2681 CATGAGGACAGCTGAGGCTGGGGAGTACCAGCATTGAAGAGGGTGGGGGAGGCATGGGTG 2622
Query 66764 AAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGA 66823
||| | | || ||||| ||||| ||||| | |||| ||||| | || ||
Sbjct 2621 AAGAATTTGCTCGACATCAGGTTGTAGGTCTCCAGGACACGCTCAATATCGTCACCCCAG 2562
Query 66824 ATCCCGAGTG-CACATCGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGAT 66882
|| |||| | |||| ||||| | | || || || || || || | | | | ||
Sbjct 2561 ATGCCGACAGACACA-CGCATGATCATGTGCTGGGGACGCTCAACAATCTTGCCATCAAT 2503
Query 66883 ATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAAAGTACGAGTAATTGAAATC 66939
| | | |||||| || || || ||||||| ||||||||| ||| | ||| ||
Sbjct 2502 CTTGAGGAGGTAGGATCGCTCAAGAGTCTTGAAGCCAAAGTACTGGTATTGGAAGTC 2446
>seq2597
Length=5433
Score = 181 bits (200), Expect = 8e-41
Identities = 560/855 (65%), Gaps = 20/855 (2%)
Strand=Plus/Plus
Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146
|| |||| |||||||| ||||| || || || |||||||| | |||||| | ||| |
Sbjct 3374 ATCTGGCAGATGTACAAGAAGGCCGAGGCCTCTTTCTGGACTGCCGAGGAGATTGATCTA 3433
Query 61147 TCCAAAGACATGAATGACTGGGAG---CGTTTATCGAGCGGTGAACAACATTTCATTAAA 61203
||||| || | | |||||| | || | | || || || ||| |
Sbjct 3434 TCCAAGGATCTCCACGACTGGAACAACCGCCTGACTGCCGACGAGCAGTTCTTCGTCTCC 3493
Query 61204 CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGT 61263
|| | | || ||||| || || || ||||| |||||||| ||||| | | || ||
Sbjct 3494 CACATCCTCGCCTTCTTCGCTGCCTCTGACGGCATCGTCAACGAGAACCTTGTCGAGCGA 3553
Query 61264 TTCGCGCAG-GAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCAT 61322
||| || | ||||| || | | ||||| || || ||||||||||||||||| ||
Sbjct 3554 TTCA-GCGGCGAGGTCCAGATCCCCGAGGCCCGATGCTTCTACGGCTTCCAGATCATGAT 3612
Query 61323 GGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGC 61382
|||||| ||||||| |||| ||| | ||||| || || ||||||| ||||| ||
Sbjct 3613 GGAGAACATCCACTCCGAGACCTACTCGCTCCTCATTGACACCTACATCAAGGAGCCAGC 3672
Query 61383 GGAACGTGAACGA-TTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCG---GAAAG 61438
|||| | | | | ||||| ||||| ||||| || || | || | || ||| |
Sbjct 3673 TCAACG-AACCTACCTCTTCAACGCCATTGAGACCATCCC--CTGT-ATCCGCAAGAAGG 3728
Query 61439 CGGATTGGGCCTTCAATTGGATCACCAGTACAACGGCT--ACATTTGGTGAACGATTGCT 61496
| || |||||| || ||||| |||| |||| || | |||| | | || | |
Sbjct 3729 CCGACTGGGCCATCCGATGGAT--CCAGGACAAGAACTCGTCCTTTGCTCAGCGTCTCGT 3786
Query 61497 GGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTT 61556
|| ||||| | ||||||||| | || ||||| || | |||||| | ||||| ||| |
Sbjct 3787 CGCCTTTGCTGCCGTCGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCCATCTTCTGGCT 3846
Query 61557 GAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGA 61616
||||| ||||| || ||||| || |||||||| ||| ||| | || || || |||||
Sbjct 3847 CAAGAAGCGTGGCCTCATGCCTGGCCTGACCTTTTCCAACGAGCTCATCTCTCGTGACGA 3906
Query 61617 GGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTC 61676
||| | || || ||||| | || || | | | || | ||| |
Sbjct 3907 GGGTCTTCACACCGACTTTGC---ATGCCTCCTCCACTCCCACCTCAAGGGCCGTGCCAG 3963
Query 61677 GGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGAC 61736
|| || | || || | || || || || || || ||||| || |||||
Sbjct 3964 CAAGCAGGTCATCCAGGACATCATCACCGATGCCGTCACCATTGAGCAGGAGTTCCTGAC 4023
Query 61737 TGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGA 61796
|| || | ||| | | || |||||||||| | || ||| |||||| || ||
Sbjct 4024 CGAGGCCCTCCCCTGCGCCCTGCTCGGCATGAACGCCGACCTCATGAAGCAGTACATCGA 4083
Query 61797 ATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAA 61856
|| || |||||||| || | |||| | || | || | |||| || | | ||
Sbjct 4084 GTTCGTCGCCGACCGCCTCCTCGTCGCCCTCGGCAACGAGAAGGTCTACAAGGCCACCAA 4143
Query 61857 CCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACG 61916
||| || || |||||||| | || || || | ||||||||| || || |||||||| ||
Sbjct 4144 CCCCTTCGACTTCATGGAGAACATCTCCCTCGGTGGCAAGACCAACTTCTTCGAGAAGCG 4203
Query 61917 TGTAGGCGACTATCA 61931
||| || ||||| ||
Sbjct 4204 TGTCGGTGACTACCA 4218
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397442035176080
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