Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20virguliforme_20[genbank_20GCA_5F001680665.1_202016-07-06] 25,997 sequences; 50,938,851 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq4116 327 9e-85 seq2597 181 8e-41 >seq4116 Length=4278 Score = 327 bits (362), Expect = 9e-85 Identities = 1209/1857 (65%), Gaps = 54/1857 (3%) Strand=Plus/Minus Query 65101 AGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTCTTGAGGCCAGCACGCCAAGCATA 65160 ||| || |||| || | || ||||||||||| ||||| ||||| | | | ||| Sbjct 4266 AGCGGCAGCCTGCGTTCGCAGGTAGTACATGCCCGTCTTCAGGCC-GAGCTTCCAGCCGG 4208 Query 65161 GAAA-TGCATCGATGATAATTTTGCATAAT-TCGGCTCGGCCACATGCATATTCAACGAC 65218 ||| ||||| | || | || |||| | | || || || || || || | ||| Sbjct 4207 CAAAGTGCAT-GCTGGTGATCTTGCCCATGGTGGGGTCCTTCATGTGGATGTTGAGGGAC 4149 Query 65219 TGACTCTGATCGATGTAACGACCACGATCTGCAGCCATGTCAATGATACGACGTCCCGAT 65278 || |||||| ||| | ||| || || |||||||| | || || | || ||| Sbjct 4148 TGGGACTGATCAATGAAGGCACCTCGGTCGGCAGCCATCTGAACGACCTGGCGCTGCGAA 4089 Query 65279 ATCTCCCAGACGGTCTTGTACAGGCGACGT-ACCTCAATTGGAATCTCCTCAATGTCCTG 65337 |||||||||||||||||||| ||| | | | ||||| || || | |||| ||| Sbjct 4088 ATCTCCCAGACGGTCTTGTAGAGG-GCCTTGACCTCGGCGGGGATGTTGGGGATGTTCTG 4030 Query 65338 GACTGAACCACGACGTGCAATAATGCGATTACGCATCGACTCTGACCACAAACCCAAATC 65397 || ||||| ||||| || || || ||| | || ||||||| |||| || Sbjct 4029 GATGGAACCGTTCTCGGCAATGATTCGGTTTTTCATGGCATCCGACCACAGGCCCATGTC 3970 Query 65398 GATAAGATG-TTGAACCAAGTGACGA-TTGATGACTTGGAACTCGCCGGACAGTACACGA 65455 | ||| | |||| | || | | |||| ||| ||||||||||| | || ||||| Sbjct 3969 AACAAGGTCCTTGAGC--AGCCAGGGGTTGACGACCTGGAACTCGCCAGCGAGGACACGG 3912 Query 65456 CGGACATAGATGTTGGACGTGATGGGTTCAAAGGATTCAGTGTTGCCTAGAATTTGGGCA 65515 || ||||||||||| ||| || || ||| | || ||||||| || || || | | Sbjct 3911 CGCTGGTAGATGTTGGAGGTGTAAGGCTCGAAGCACTCGTTGTTGCCCAGGATCTGCGAA 3852 Query 65516 GTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTTTCGCAATCCGT--TCATTTCAA 65573 ||| ||||| ||||| || || | || || ||| || | |||| || || Sbjct 3851 GTACTGGCAGTAGGCATAGGGGCAAGCAGCAGACTGTTGCGAATGCCGTGCTCCTTGACC 3792 Query 65574 TGTTG--TGACGCAATTCGTCCCAGTTCCACATCGGTTTATCGTCGACATCCACGGGCCA 65631 || | ||| | ||| ||||||| ||| | | | | | | | || || ||| Sbjct 3791 TGCTCCCTGAGG---TTC-TCCCAGTCCCAGA---GGTCA--GAAGGCTTC-ACATTCCA 3742 Query 65632 CATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAACCGAGGAAACTATCGTACACTCC 65691 ||| || || || | || | ||| || || || ||| | ||| || Sbjct 3741 CATGTCGAACTGGAGAATACCCTCAGAGGCGGGAGAGCCCTTGAAGGTGGAGTAGGGACC 3682 Query 65692 CTCCTCCTTGGCAAGTTG-ACAGCTGGTCTCGAGTGCGGCAAAATAAATGGTCTCGAAAA 65750 |||||||||||| || || || | | | ||| || ||| || ||||||||||| | Sbjct 3681 CTCCTCCTTGGCCAGCTGCACCGAAGCAGT-GAGGGCAGCATGGTAGATGGTCTCGAAGA 3623 Query 65751 TGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTACGGCATACCCATCAGGACAAAAG 65810 | | || || ||||| ||||| |||| | ||||| | || | |||| Sbjct 3622 TCTGCTTGTTGAGCTCACGAGCCTCGGGAGACTCGAAAGGCATGCGCAGAGCAAGGAAAG 3563 Query 65811 TGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGACGCAAATTGGAACGTCTCG 65870 || || ||||| || || |||| ||| ||||| || || |||| ||| | | Sbjct 3562 CATCAGCAAGACCCTGGACACCAACACCAATGGGTCGGTGTCGCATGTTGCTGTTGCGAG 3503 Query 65871 CCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGATTCAAATTGCGTGTCACCACAT 65930 | || | |||||||||| || | |||||||| | |||| ||||| || || | Sbjct 3502 CTTCCGTAACAGGGTAGTGGTTCACGTCGATAATCCTGTTCAGGTTGCGAACGACAACCT 3443 Query 65931 GCACGATACGTCG--CAATTGTTCGAAATCAAAATGTTTAGGACGATCGGGAGTGCCGGA 65988 | || ||||| ||| | | ||| ||| | || | |||| ||| || Sbjct 3442 GTGTGA--CGTCGTGCAACTTCTGGAAGTCATAGCA---AGCATCATCGT-AGTTGATGA 3389 Query 65989 CACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGC 66048 || || || ||||| ||||| || |||||||||||||| | ||| ||||| || Sbjct 3388 ----ACGAA----GGCAGGGCCAGAGAAGCAAGGTTGCAGACAGCAACCTCATCAGGGGC 3337 Query 66049 GGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTG 66108 | ||||||| ||| |||||||| ||||| || || |||||||||| |||| || Sbjct 3336 GCAGTACTCGATAATCTCGGTGCAGAGATTGGAGCTACGGATGGTGCCCAGGTTCTTCTG 3277 Query 66109 ATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTG 66168 || |||||||| ||||| |||||||| | |||| | || |||||||||| || Sbjct 3276 GTTGCTCTTGCGGTTGCAGTGGTCCTTGTAGAGCATGAAGGGGTTGCCGGTCTCGGTCTG 3217 Query 66169 GGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTACCTTT 66228 | ||| | |||||| | ||| || | ||||||| || | | | |||| | Sbjct 3216 CGCCTCGAGGATGGCATACCAGAGCTTCTGGGCCTTCATGGT-CTTGCGACCCTTGCCCG 3158 Query 66229 GCGT-TCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACT--TCGGACAGACA 66285 | | || || | |||||| || ||||| | | | ||||| |||| ||||| Sbjct 3157 CCTTCTCATACTTTTCGTAAAGAGCCTCGAAC--TCCTCGCCATAGCAGTCGGCCAGACC 3100 Query 66286 TGGACACTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAA 66345 || |||| || |||||||| || | ||| ||||| | || || ||||| ||| || Sbjct 3099 GGGGCACTCGTTGGGACACATGAGGGTCCAGTCACCGTTCTTCTCGACACGCTTCATGAA 3040 Query 66346 TAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTG 66405 ||||| || |||||||| || ||| || ||||| || || |||||| ||||||| Sbjct 3039 GAGATCGGGAATCCAGAGAGCCAGGAACAGGTCGCGGGCGCGGACCTCCTCCTTGCCGTG 2980 Query 66406 ATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGC 66465 || ||||||| ||| ||||||||||||| || || ||||| || || ||||||||||| Sbjct 2979 GTTCTTGCGCAGGTCAAGGAACTCAAAGACATCTGCGTGCCAGGGCTCAAGGTAGATGGC 2920 Query 66466 GAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGAC 66525 || | || || ||| |||||| ||||||||||| || || ||||||||||| Sbjct 2919 AAAGGCACCAGGTCGCTTGTTGCCACCCTGGTCGACGTACCGGGCAGTGTTGTTGAAGAC 2860 Query 66526 ACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCG 66585 ||| | ||| || || ||||| || | || ||||| || ||||| || || Sbjct 2859 ACGAAGCATGGGGGTGACACCGTTGGAGGTACCGTTGGTACCAGCGATGTAAGAGCCAGT 2800 Query 66586 TGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACA 66645 || || || ||| || ||||| || |||||||| ||| |||| ||||| ||||| Sbjct 2799 GGCACGGATTCGGTGGACGTTCAGGCCGATACCACCCGCCATCTTGGAGATCATGGCACA 2740 Query 66646 -ATC-GGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAG 66703 || | | | || |||| || |||||| ||| | || ||| | ||| || Sbjct 2739 GGTCTTGAGAGTATCATAAATA--CCCTCAATGCTGTCCTCTTTCATGTCGACCAGGAAG 2682 Query 66704 CATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTA 66763 ||||| || || || | ||| || | || |||||||||||| | || || || Sbjct 2681 CATGAGGACAGCTGAGGCTGGGGAGTACCAGCATTGAAGAGGGTGGGGGAGGCATGGGTG 2622 Query 66764 AAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGA 66823 ||| | | || ||||| ||||| ||||| | |||| ||||| | || || Sbjct 2621 AAGAATTTGCTCGACATCAGGTTGTAGGTCTCCAGGACACGCTCAATATCGTCACCCCAG 2562 Query 66824 ATCCCGAGTG-CACATCGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGAT 66882 || |||| | |||| ||||| | | || || || || || || | | | | || Sbjct 2561 ATGCCGACAGACACA-CGCATGATCATGTGCTGGGGACGCTCAACAATCTTGCCATCAAT 2503 Query 66883 ATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAAAGTACGAGTAATTGAAATC 66939 | | | |||||| || || || ||||||| ||||||||| ||| | ||| || Sbjct 2502 CTTGAGGAGGTAGGATCGCTCAAGAGTCTTGAAGCCAAAGTACTGGTATTGGAAGTC 2446 >seq2597 Length=5433 Score = 181 bits (200), Expect = 8e-41 Identities = 560/855 (65%), Gaps = 20/855 (2%) Strand=Plus/Plus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| ||||| || || || |||||||| | |||||| | ||| | Sbjct 3374 ATCTGGCAGATGTACAAGAAGGCCGAGGCCTCTTTCTGGACTGCCGAGGAGATTGATCTA 3433 Query 61147 TCCAAAGACATGAATGACTGGGAG---CGTTTATCGAGCGGTGAACAACATTTCATTAAA 61203 ||||| || | | |||||| | || | | || || || ||| | Sbjct 3434 TCCAAGGATCTCCACGACTGGAACAACCGCCTGACTGCCGACGAGCAGTTCTTCGTCTCC 3493 Query 61204 CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGT 61263 || | | || ||||| || || || ||||| |||||||| ||||| | | || || Sbjct 3494 CACATCCTCGCCTTCTTCGCTGCCTCTGACGGCATCGTCAACGAGAACCTTGTCGAGCGA 3553 Query 61264 TTCGCGCAG-GAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCAT 61322 ||| || | ||||| || | | ||||| || || ||||||||||||||||| || Sbjct 3554 TTCA-GCGGCGAGGTCCAGATCCCCGAGGCCCGATGCTTCTACGGCTTCCAGATCATGAT 3612 Query 61323 GGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGC 61382 |||||| ||||||| |||| ||| | ||||| || || ||||||| ||||| || Sbjct 3613 GGAGAACATCCACTCCGAGACCTACTCGCTCCTCATTGACACCTACATCAAGGAGCCAGC 3672 Query 61383 GGAACGTGAACGA-TTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCG---GAAAG 61438 |||| | | | | ||||| ||||| ||||| || || | || | || ||| | Sbjct 3673 TCAACG-AACCTACCTCTTCAACGCCATTGAGACCATCCC--CTGT-ATCCGCAAGAAGG 3728 Query 61439 CGGATTGGGCCTTCAATTGGATCACCAGTACAACGGCT--ACATTTGGTGAACGATTGCT 61496 | || |||||| || ||||| |||| |||| || | |||| | | || | | Sbjct 3729 CCGACTGGGCCATCCGATGGAT--CCAGGACAAGAACTCGTCCTTTGCTCAGCGTCTCGT 3786 Query 61497 GGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTT 61556 || ||||| | ||||||||| | || ||||| || | |||||| | ||||| ||| | Sbjct 3787 CGCCTTTGCTGCCGTCGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCCATCTTCTGGCT 3846 Query 61557 GAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGA 61616 ||||| ||||| || ||||| || |||||||| ||| ||| | || || || ||||| Sbjct 3847 CAAGAAGCGTGGCCTCATGCCTGGCCTGACCTTTTCCAACGAGCTCATCTCTCGTGACGA 3906 Query 61617 GGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTC 61676 ||| | || || ||||| | || || | | | || | ||| | Sbjct 3907 GGGTCTTCACACCGACTTTGC---ATGCCTCCTCCACTCCCACCTCAAGGGCCGTGCCAG 3963 Query 61677 GGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGAC 61736 || || | || || | || || || || || || ||||| || ||||| Sbjct 3964 CAAGCAGGTCATCCAGGACATCATCACCGATGCCGTCACCATTGAGCAGGAGTTCCTGAC 4023 Query 61737 TGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGA 61796 || || | ||| | | || |||||||||| | || ||| |||||| || || Sbjct 4024 CGAGGCCCTCCCCTGCGCCCTGCTCGGCATGAACGCCGACCTCATGAAGCAGTACATCGA 4083 Query 61797 ATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAA 61856 || || |||||||| || | |||| | || | || | |||| || | | || Sbjct 4084 GTTCGTCGCCGACCGCCTCCTCGTCGCCCTCGGCAACGAGAAGGTCTACAAGGCCACCAA 4143 Query 61857 CCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACG 61916 ||| || || |||||||| | || || || | ||||||||| || || |||||||| || Sbjct 4144 CCCCTTCGACTTCATGGAGAACATCTCCCTCGGTGGCAAGACCAACTTCTTCGAGAAGCG 4203 Query 61917 TGTAGGCGACTATCA 61931 ||| || ||||| || Sbjct 4204 TGTCGGTGACTACCA 4218 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397442035176080