Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gaeumannomyces_20sp._20JS-464_20[genbank_20GCA_5F002197995.1_202017-
06-19] 80 sequences; 53,151,282 total letters
Query= AAMG01000190.1
Length=117
Score E
Sequences producing significant alignments: (Bits) Value
seq10 143 1e-32
seq45 87.8 1e-15
>seq10
Length=40229
Score = 143 bits (158), Expect = 1e-32
Identities = 104/118 (88%), Gaps = 2/118 (2%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGA-TTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCC 59
||||||| | |||| | |||| ||||||||||||||| ||||||| |||||| ||||
Sbjct 1942 GAACCCAGAAACTTGTACTTTCGTGTAAGGTGCCGAGCGGGTCAAAAA-ATAACACCGCC 2000
Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
||||||||||||||||||||||| |||||||||||| ||||||||||||||| |||||
Sbjct 2001 CGATCCCTAGTCGGCATAGTTTATGGTTAAGACTACAACGGTATCTGATCGTTTTCGA 2058
Score = 143 bits (158), Expect = 1e-32
Identities = 104/118 (88%), Gaps = 2/118 (2%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGA-TTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCC 59
||||||| | |||| | |||| ||||||||||||||| ||||||| |||||| ||||
Sbjct 9484 GAACCCAGAAACTTGTACTTTCGTGTAAGGTGCCGAGCGGGTCAAAAA-ATAACACCGCC 9542
Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
||||||||||||||||||||||| |||||||||||| ||||||||||||||| |||||
Sbjct 9543 CGATCCCTAGTCGGCATAGTTTATGGTTAAGACTACAACGGTATCTGATCGTTTTCGA 9600
Score = 143 bits (158), Expect = 1e-32
Identities = 104/118 (88%), Gaps = 2/118 (2%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGA-TTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCC 59
||||||| | |||| | |||| ||||||||||||||| ||||||| |||||| ||||
Sbjct 18705 GAACCCAGAAACTTGTACTTTCGTGTAAGGTGCCGAGCGGGTCAAAAA-ATAACACCGCC 18763
Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
||||||||||||||||||||||| |||||||||||| ||||||||||||||| |||||
Sbjct 18764 CGATCCCTAGTCGGCATAGTTTATGGTTAAGACTACAACGGTATCTGATCGTTTTCGA 18821
Score = 143 bits (158), Expect = 1e-32
Identities = 104/118 (88%), Gaps = 2/118 (2%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGA-TTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCC 59
||||||| | |||| | |||| ||||||||||||||| ||||||| |||||| ||||
Sbjct 36309 GAACCCAGAAACTTGTACTTTCGTGTAAGGTGCCGAGCGGGTCAAAAA-ATAACACCGCC 36367
Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
||||||||||||||||||||||| |||||||||||| ||||||||||||||| |||||
Sbjct 36368 CGATCCCTAGTCGGCATAGTTTATGGTTAAGACTACAACGGTATCTGATCGTTTTCGA 36425
>seq45
Length=5506958
Score = 87.8 bits (96), Expect = 1e-15
Identities = 67/78 (86%), Gaps = 1/78 (1%)
Strand=Plus/Minus
Query 29 GTGCCGAGCGAGTCAAAATGATAACATCGCCCGATCCCTAGTCGGCATAGTTTACGGTTA 88
|||||||||| ||||||| |||||| | ||||||||||||||||||||||||| |||||
Sbjct 2770714 GTGCCGAGCGGGTCAAAAA-ATAACACCACCCGATCCCTAGTCGGCATAGTTTATGGTTA 2770656
Query 89 AGACTACGACGGTATCTG 106
||| | | | |||||||
Sbjct 2770655 AGAATTCAAGAGTATCTG 2770638
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 278399791200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |