Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gaeumannomyces_20sp._20JS-464_20[genbank_20GCA_5F002197995.1_202017-
06-19] 80 sequences; 53,151,282 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq10 495 7e-138
>seq10
Length=40229
Score = 495 bits (548), Expect = 7e-138
Identities = 299/314 (95%), Gaps = 1/314 (0%)
Strand=Plus/Minus
Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64
|||||||||||||||||||| |||||||| || ||||||||| |||||| ||| ||||||
Sbjct 2372 TGGTCCGGCCGGGCCTTTCCCTCTGGGGAGCCCCATGCCCTTTACTGGGCGTGGCGGGGA 2313
Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 2312 ACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTATGCTCGAATACAT 2253
Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 184
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 2252 TAGCATGGAATAATAGAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 2193
Query 185 AATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 244
||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 2192 AATGATTAATAGGGACAGTCGGGGGCGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 2133
Query 245 ATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGA 304
||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| ||
Sbjct 2132 ATTTATTGAAGACTAACTACTGCGAAAGCATTCGTCAAGGATGTTTTCATTAATCAG-GA 2074
Query 305 ACGAAAGTTAGGGG 318
||||||||||||||
Sbjct 2073 ACGAAAGTTAGGGG 2060
Score = 495 bits (548), Expect = 7e-138
Identities = 299/314 (95%), Gaps = 1/314 (0%)
Strand=Plus/Minus
Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64
|||||||||||||||||||| |||||||| || ||||||||| |||||| ||| ||||||
Sbjct 9914 TGGTCCGGCCGGGCCTTTCCCTCTGGGGAGCCCCATGCCCTTTACTGGGCGTGGCGGGGA 9855
Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 9854 ACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTATGCTCGAATACAT 9795
Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 184
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 9794 TAGCATGGAATAATAGAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 9735
Query 185 AATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 244
||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 9734 AATGATTAATAGGGACAGTCGGGGGCGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 9675
Query 245 ATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGA 304
||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| ||
Sbjct 9674 ATTTATTGAAGACTAACTACTGCGAAAGCATTCGTCAAGGATGTTTTCATTAATCAG-GA 9616
Query 305 ACGAAAGTTAGGGG 318
||||||||||||||
Sbjct 9615 ACGAAAGTTAGGGG 9602
Score = 495 bits (548), Expect = 7e-138
Identities = 299/314 (95%), Gaps = 1/314 (0%)
Strand=Plus/Minus
Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64
|||||||||||||||||||| |||||||| || ||||||||| |||||| ||| ||||||
Sbjct 19135 TGGTCCGGCCGGGCCTTTCCCTCTGGGGAGCCCCATGCCCTTTACTGGGCGTGGCGGGGA 19076
Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 19075 ACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTATGCTCGAATACAT 19016
Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 184
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 19015 TAGCATGGAATAATAGAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 18956
Query 185 AATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 244
||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 18955 AATGATTAATAGGGACAGTCGGGGGCGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 18896
Query 245 ATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGA 304
||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| ||
Sbjct 18895 ATTTATTGAAGACTAACTACTGCGAAAGCATTCGTCAAGGATGTTTTCATTAATCAG-GA 18837
Query 305 ACGAAAGTTAGGGG 318
||||||||||||||
Sbjct 18836 ACGAAAGTTAGGGG 18823
Score = 495 bits (548), Expect = 7e-138
Identities = 299/314 (95%), Gaps = 1/314 (0%)
Strand=Plus/Minus
Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64
|||||||||||||||||||| |||||||| || ||||||||| |||||| ||| ||||||
Sbjct 36739 TGGTCCGGCCGGGCCTTTCCCTCTGGGGAGCCCCATGCCCTTTACTGGGCGTGGCGGGGA 36680
Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 36679 ACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTATGCTCGAATACAT 36620
Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 184
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 36619 TAGCATGGAATAATAGAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 36560
Query 185 AATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 244
||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 36559 AATGATTAATAGGGACAGTCGGGGGCGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 36500
Query 245 ATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGA 304
||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| ||
Sbjct 36499 ATTTATTGAAGACTAACTACTGCGAAAGCATTCGTCAAGGATGTTTTCATTAATCAG-GA 36441
Query 305 ACGAAAGTTAGGGG 318
||||||||||||||
Sbjct 36440 ACGAAAGTTAGGGG 36427
Score = 253 bits (280), Expect = 4e-65
Identities = 154/163 (94%), Gaps = 0/163 (0%)
Strand=Plus/Minus
Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64
|||||||||||||||||||| |||||||| || ||||||||| |||||| ||| ||||||
Sbjct 27520 TGGTCCGGCCGGGCCTTTCCCTCTGGGGAGCCCCATGCCCTTTACTGGGCGTGGCGGGGA 27461
Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 27460 ACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTATGCTCGAATACAT 27401
Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTG 167
||||||||||||||||||||||||||| |||||||||||||||
Sbjct 27400 TAGCATGGAATAATAGAATAGGACGTGTGGTTCTATTTTGTTG 27358
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915199267840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |