Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gaeumannomyces_20sp._20JS-464_20[genbank_20GCA_5F002197995.1_202017- 06-19] 80 sequences; 53,151,282 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq10 728 0.0 seq45 100 1e-18 seq1 98.7 4e-18 >seq10 Length=40229 Score = 728 bits (806), Expect = 0.0 Identities = 568/672 (85%), Gaps = 8/672 (1%) Strand=Plus/Minus Query 14 GCCTAGCCG-TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATG 72 ||| |||| ||| |||||||||||||||||||||| |||||||||||| |||||||||| Sbjct 16934 GCCGAGCCTCTGTAAAGCTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATG 16875 Query 73 GGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGT 132 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 16874 GGAGGTAAATTTCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGT 16815 Query 133 GATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAG 192 |||||||||||||||||||||||| |||||| |||||| ||||||||||||||||||||| Sbjct 16814 GATCGAAAGATGAAAAGCACTTTGAAAAGAGGGTTAAATAGCACGTGAAATTGTTGAAAG 16755 Query 193 GGAAGCGCTTGCAACCAGACTTGCCCGCAGTTGCTCAACCGGC-CCCTCGGCCGGTGCAC 251 ||||||||| | ||||||||||| | | | ||| || || ||| || ||||||| Sbjct 16754 GGAAGCGCTCGTGACCAGACTTGCGCCGGGCGGATCATCCAGCGTTCTC-GCTGGTGCAC 16696 Query 252 TCTTCTGCGGTCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGC 311 || | | ||||||||||||| | | || | ||| ||| || |||||| || || Sbjct 16695 TCCGCCCGGCTCAGGCCAGCATCGGTTTTCGCCGGGGGACAAAAGCTTCGGGAACGTAGC 16636 Query 312 CCCCTTCGGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCG 371 || |||||| ||||||||||||| | | ||| | || || |||| |||| ||||| Sbjct 16635 TCCTCTCGGGGAGTGTTATAGCCCGTCGCGTAATAC-CCCGGCGGGGACCGAGGACCGCG 16577 Query 372 CTCCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGG 431 || |||| ||||||||||||||||||| | |||| ||||||||| |||||||||| ||| Sbjct 16576 CTTCGGCAAGGATGCTGGCGTAATGGTCATCAGCGACCCGTCTTGAAACACGGACCGAGG 16517 Query 432 AGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGG 491 |||| | ||| ||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct 16516 AGTCAAGCATTAGTGCGAGTGTTTGGGTGTAAAACCCGCACGCGTAATGAAAGTGAACGT 16457 Query 492 AGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAG 551 ||||| || | || ||| ||||||||||||||||||| |||||||||||||||| Sbjct 16456 AGGTGAGA----GCTTCGGCGCATCATCGACCGATCCTGATGTTTTCGGATGGATTTGAG 16401 Query 552 TAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCA 611 || |||||| | | ||||||||||||||||||||||| | ||||||||||||||||| Sbjct 16400 TAGGAGCATTAACGCTTGGACCCGAAAGATGGTGAACTATACTTGAATAGGGTGAAGCCA 16341 Query 612 GAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGG 671 |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 16340 GAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGA 16281 Query 672 GTATAGGGGCGA 683 |||||||||||| Sbjct 16280 GTATAGGGGCGA 16269 Score = 728 bits (806), Expect = 0.0 Identities = 568/672 (85%), Gaps = 8/672 (1%) Strand=Plus/Minus Query 14 GCCTAGCCG-TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATG 72 ||| |||| ||| |||||||||||||||||||||| |||||||||||| |||||||||| Sbjct 26158 GCCGAGCCTCTGTAAAGCTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATG 26099 Query 73 GGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGT 132 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 26098 GGAGGTAAATTTCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGT 26039 Query 133 GATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAG 192 |||||||||||||||||||||||| |||||| |||||| ||||||||||||||||||||| Sbjct 26038 GATCGAAAGATGAAAAGCACTTTGAAAAGAGGGTTAAATAGCACGTGAAATTGTTGAAAG 25979 Query 193 GGAAGCGCTTGCAACCAGACTTGCCCGCAGTTGCTCAACCGGC-CCCTCGGCCGGTGCAC 251 ||||||||| | ||||||||||| | | | ||| || || ||| || ||||||| Sbjct 25978 GGAAGCGCTCGTGACCAGACTTGCGCCGGGCGGATCATCCAGCGTTCTC-GCTGGTGCAC 25920 Query 252 TCTTCTGCGGTCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGC 311 || | | ||||||||||||| | | || | ||| ||| || |||||| || || Sbjct 25919 TCCGCCCGGCTCAGGCCAGCATCGGTTTTCGCCGGGGGACAAAAGCTTCGGGAACGTAGC 25860 Query 312 CCCCTTCGGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCG 371 || |||||| ||||||||||||| | | ||| | || || |||| |||| ||||| Sbjct 25859 TCCTCTCGGGGAGTGTTATAGCCCGTCGCGTAATAC-CCCGGCGGGGACCGAGGACCGCG 25801 Query 372 CTCCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGG 431 || |||| ||||||||||||||||||| | |||| ||||||||| |||||||||| ||| Sbjct 25800 CTTCGGCAAGGATGCTGGCGTAATGGTCATCAGCGACCCGTCTTGAAACACGGACCGAGG 25741 Query 432 AGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGG 491 |||| | ||| ||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct 25740 AGTCAAGCATTAGTGCGAGTGTTTGGGTGTAAAACCCGCACGCGTAATGAAAGTGAACGT 25681 Query 492 AGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAG 551 ||||| || | || ||| ||||||||||||||||||| |||||||||||||||| Sbjct 25680 AGGTGAGA----GCTTCGGCGCATCATCGACCGATCCTGATGTTTTCGGATGGATTTGAG 25625 Query 552 TAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCA 611 || |||||| | | ||||||||||||||||||||||| | ||||||||||||||||| Sbjct 25624 TAGGAGCATTAACGCTTGGACCCGAAAGATGGTGAACTATACTTGAATAGGGTGAAGCCA 25565 Query 612 GAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGG 671 |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 25564 GAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGA 25505 Query 672 GTATAGGGGCGA 683 |||||||||||| Sbjct 25504 GTATAGGGGCGA 25493 Score = 728 bits (806), Expect = 0.0 Identities = 568/672 (85%), Gaps = 8/672 (1%) Strand=Plus/Minus Query 14 GCCTAGCCG-TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATG 72 ||| |||| ||| |||||||||||||||||||||| |||||||||||| |||||||||| Sbjct 34538 GCCGAGCCTCTGTAAAGCTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATG 34479 Query 73 GGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGT 132 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 34478 GGAGGTAAATTTCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGT 34419 Query 133 GATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAG 192 |||||||||||||||||||||||| |||||| |||||| ||||||||||||||||||||| Sbjct 34418 GATCGAAAGATGAAAAGCACTTTGAAAAGAGGGTTAAATAGCACGTGAAATTGTTGAAAG 34359 Query 193 GGAAGCGCTTGCAACCAGACTTGCCCGCAGTTGCTCAACCGGC-CCCTCGGCCGGTGCAC 251 ||||||||| | ||||||||||| | | | ||| || || ||| || ||||||| Sbjct 34358 GGAAGCGCTCGTGACCAGACTTGCGCCGGGCGGATCATCCAGCGTTCTC-GCTGGTGCAC 34300 Query 252 TCTTCTGCGGTCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGC 311 || | | ||||||||||||| | | || | ||| ||| || |||||| || || Sbjct 34299 TCCGCCCGGCTCAGGCCAGCATCGGTTTTCGCCGGGGGACAAAAGCTTCGGGAACGTAGC 34240 Query 312 CCCCTTCGGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCG 371 || |||||| ||||||||||||| | | ||| | || || |||| |||| ||||| Sbjct 34239 TCCTCTCGGGGAGTGTTATAGCCCGTCGCGTAATAC-CCCGGCGGGGACCGAGGACCGCG 34181 Query 372 CTCCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGG 431 || |||| ||||||||||||||||||| | |||| ||||||||| |||||||||| ||| Sbjct 34180 CTTCGGCAAGGATGCTGGCGTAATGGTCATCAGCGACCCGTCTTGAAACACGGACCGAGG 34121 Query 432 AGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGG 491 |||| | ||| ||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct 34120 AGTCAAGCATTAGTGCGAGTGTTTGGGTGTAAAACCCGCACGCGTAATGAAAGTGAACGT 34061 Query 492 AGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAG 551 ||||| || | || ||| ||||||||||||||||||| |||||||||||||||| Sbjct 34060 AGGTGAGA----GCTTCGGCGCATCATCGACCGATCCTGATGTTTTCGGATGGATTTGAG 34005 Query 552 TAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCA 611 || |||||| | | ||||||||||||||||||||||| | ||||||||||||||||| Sbjct 34004 TAGGAGCATTAACGCTTGGACCCGAAAGATGGTGAACTATACTTGAATAGGGTGAAGCCA 33945 Query 612 GAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGG 671 |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 33944 GAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGA 33885 Query 672 GTATAGGGGCGA 683 |||||||||||| Sbjct 33884 GTATAGGGGCGA 33873 Score = 257 bits (284), Expect = 7e-66 Identities = 161/172 (94%), Gaps = 1/172 (1%) Strand=Plus/Minus Query 14 GCCTAGCCG-TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATG 72 ||| |||| ||| |||||||||||||||||||||| |||||||||||| |||||||||| Sbjct 172 GCCGAGCCTCTGTAAAGCTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATG 113 Query 73 GGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGT 132 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 112 GGAGGTAAATTTCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGT 53 Query 133 GATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATT 184 |||||||||||||||||||||||| |||||| |||||| ||||||||||||| Sbjct 52 GATCGAAAGATGAAAAGCACTTTGAAAAGAGGGTTAAATAGCACGTGAAATT 1 >seq45 Length=5506958 Score = 100 bits (110), Expect = 1e-18 Identities = 122/166 (73%), Gaps = 4/166 (2%) Strand=Plus/Minus Query 466 CCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGA 525 |||| ||||||||||||||||||| ||||| || | |||||| ||||| |||| Sbjct 354715 CCCGCACGCGTAATGAAAGTGAACGTAGGTGAGAGCTTC----GGTGCATCATCGGCCGA 354660 Query 526 TCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTG 585 || | ||| ||| | || | ||| | | || | | | | || ||||| |||||| Sbjct 354659 TCTGGGTGTTTTCAGCCCGACTGGAGCAGGGGCGTCGACGCTTGGGCCCGAGAGATGGAC 354600 Query 586 AACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGC 631 ||| |||||||||||| |||| |||||||| ||| ||||||||| Sbjct 354599 GACTGGGCCTGAATAGGGCGAAGACAGAGGAAGCTCCGGTGGAGGC 354554 Score = 75.2 bits (82), Expect = 5e-11 Identities = 56/66 (85%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 367 CCGCGCTCCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGAC 426 ||||||| |||| ||||||||||||||| ||| | |||| ||||||||| |||| || | Sbjct 354521 CCGCGCTTCGGCAAGGATGCTGGCGTAACGGTCATCAGCGACCCGTCTTGAAACAAGGGC 354462 Query 427 CAAGGA 432 |||||| Sbjct 354461 CAAGGA 354456 >seq1 Length=15654088 Score = 98.7 bits (108), Expect = 4e-18 Identities = 87/106 (82%), Gaps = 2/106 (2%) Strand=Plus/Plus Query 357 GGACTGAGGTCCGCGCTCCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTG 416 |||| |||| ||||||| |||| ||| || |||||||||||| | |||| |||| |||| Sbjct 1281362 GGACCGAGGGCCGCGCTTCGGCAAGGGTGATGGCGTAATGGTCATCAGCGACCCGCCTTG 1281421 Query 417 GAACACGGACCAAGGAGTCTAACATCTA-TGCGAGTGTTTGGGTGT 461 |||||||| | ||||||| | || ||| ||||||||||||| ||| Sbjct 1281422 AAACACGGATCGAGGAGTCAAGCA-CTAGTGCGAGTGTTTGGCTGT 1281466 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079998284000