Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gaeumannomyces_20sp._20JS-464_20[genbank_20GCA_5F002197995.1_202017-
06-19] 80 sequences; 53,151,282 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq10 728 0.0
seq45 100 1e-18
seq1 98.7 4e-18
>seq10
Length=40229
Score = 728 bits (806), Expect = 0.0
Identities = 568/672 (85%), Gaps = 8/672 (1%)
Strand=Plus/Minus
Query 14 GCCTAGCCG-TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATG 72
||| |||| ||| |||||||||||||||||||||| |||||||||||| ||||||||||
Sbjct 16934 GCCGAGCCTCTGTAAAGCTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATG 16875
Query 73 GGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGT 132
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 16874 GGAGGTAAATTTCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGT 16815
Query 133 GATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAG 192
|||||||||||||||||||||||| |||||| |||||| |||||||||||||||||||||
Sbjct 16814 GATCGAAAGATGAAAAGCACTTTGAAAAGAGGGTTAAATAGCACGTGAAATTGTTGAAAG 16755
Query 193 GGAAGCGCTTGCAACCAGACTTGCCCGCAGTTGCTCAACCGGC-CCCTCGGCCGGTGCAC 251
||||||||| | ||||||||||| | | | ||| || || ||| || |||||||
Sbjct 16754 GGAAGCGCTCGTGACCAGACTTGCGCCGGGCGGATCATCCAGCGTTCTC-GCTGGTGCAC 16696
Query 252 TCTTCTGCGGTCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGC 311
|| | | ||||||||||||| | | || | ||| ||| || |||||| || ||
Sbjct 16695 TCCGCCCGGCTCAGGCCAGCATCGGTTTTCGCCGGGGGACAAAAGCTTCGGGAACGTAGC 16636
Query 312 CCCCTTCGGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCG 371
|| |||||| ||||||||||||| | | ||| | || || |||| |||| |||||
Sbjct 16635 TCCTCTCGGGGAGTGTTATAGCCCGTCGCGTAATAC-CCCGGCGGGGACCGAGGACCGCG 16577
Query 372 CTCCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGG 431
|| |||| ||||||||||||||||||| | |||| ||||||||| |||||||||| |||
Sbjct 16576 CTTCGGCAAGGATGCTGGCGTAATGGTCATCAGCGACCCGTCTTGAAACACGGACCGAGG 16517
Query 432 AGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGG 491
|||| | ||| ||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct 16516 AGTCAAGCATTAGTGCGAGTGTTTGGGTGTAAAACCCGCACGCGTAATGAAAGTGAACGT 16457
Query 492 AGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAG 551
||||| || | || ||| ||||||||||||||||||| ||||||||||||||||
Sbjct 16456 AGGTGAGA----GCTTCGGCGCATCATCGACCGATCCTGATGTTTTCGGATGGATTTGAG 16401
Query 552 TAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCA 611
|| |||||| | | ||||||||||||||||||||||| | |||||||||||||||||
Sbjct 16400 TAGGAGCATTAACGCTTGGACCCGAAAGATGGTGAACTATACTTGAATAGGGTGAAGCCA 16341
Query 612 GAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGG 671
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 16340 GAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGA 16281
Query 672 GTATAGGGGCGA 683
||||||||||||
Sbjct 16280 GTATAGGGGCGA 16269
Score = 728 bits (806), Expect = 0.0
Identities = 568/672 (85%), Gaps = 8/672 (1%)
Strand=Plus/Minus
Query 14 GCCTAGCCG-TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATG 72
||| |||| ||| |||||||||||||||||||||| |||||||||||| ||||||||||
Sbjct 26158 GCCGAGCCTCTGTAAAGCTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATG 26099
Query 73 GGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGT 132
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 26098 GGAGGTAAATTTCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGT 26039
Query 133 GATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAG 192
|||||||||||||||||||||||| |||||| |||||| |||||||||||||||||||||
Sbjct 26038 GATCGAAAGATGAAAAGCACTTTGAAAAGAGGGTTAAATAGCACGTGAAATTGTTGAAAG 25979
Query 193 GGAAGCGCTTGCAACCAGACTTGCCCGCAGTTGCTCAACCGGC-CCCTCGGCCGGTGCAC 251
||||||||| | ||||||||||| | | | ||| || || ||| || |||||||
Sbjct 25978 GGAAGCGCTCGTGACCAGACTTGCGCCGGGCGGATCATCCAGCGTTCTC-GCTGGTGCAC 25920
Query 252 TCTTCTGCGGTCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGC 311
|| | | ||||||||||||| | | || | ||| ||| || |||||| || ||
Sbjct 25919 TCCGCCCGGCTCAGGCCAGCATCGGTTTTCGCCGGGGGACAAAAGCTTCGGGAACGTAGC 25860
Query 312 CCCCTTCGGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCG 371
|| |||||| ||||||||||||| | | ||| | || || |||| |||| |||||
Sbjct 25859 TCCTCTCGGGGAGTGTTATAGCCCGTCGCGTAATAC-CCCGGCGGGGACCGAGGACCGCG 25801
Query 372 CTCCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGG 431
|| |||| ||||||||||||||||||| | |||| ||||||||| |||||||||| |||
Sbjct 25800 CTTCGGCAAGGATGCTGGCGTAATGGTCATCAGCGACCCGTCTTGAAACACGGACCGAGG 25741
Query 432 AGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGG 491
|||| | ||| ||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct 25740 AGTCAAGCATTAGTGCGAGTGTTTGGGTGTAAAACCCGCACGCGTAATGAAAGTGAACGT 25681
Query 492 AGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAG 551
||||| || | || ||| ||||||||||||||||||| ||||||||||||||||
Sbjct 25680 AGGTGAGA----GCTTCGGCGCATCATCGACCGATCCTGATGTTTTCGGATGGATTTGAG 25625
Query 552 TAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCA 611
|| |||||| | | ||||||||||||||||||||||| | |||||||||||||||||
Sbjct 25624 TAGGAGCATTAACGCTTGGACCCGAAAGATGGTGAACTATACTTGAATAGGGTGAAGCCA 25565
Query 612 GAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGG 671
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 25564 GAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGA 25505
Query 672 GTATAGGGGCGA 683
||||||||||||
Sbjct 25504 GTATAGGGGCGA 25493
Score = 728 bits (806), Expect = 0.0
Identities = 568/672 (85%), Gaps = 8/672 (1%)
Strand=Plus/Minus
Query 14 GCCTAGCCG-TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATG 72
||| |||| ||| |||||||||||||||||||||| |||||||||||| ||||||||||
Sbjct 34538 GCCGAGCCTCTGTAAAGCTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATG 34479
Query 73 GGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGT 132
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 34478 GGAGGTAAATTTCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGT 34419
Query 133 GATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAG 192
|||||||||||||||||||||||| |||||| |||||| |||||||||||||||||||||
Sbjct 34418 GATCGAAAGATGAAAAGCACTTTGAAAAGAGGGTTAAATAGCACGTGAAATTGTTGAAAG 34359
Query 193 GGAAGCGCTTGCAACCAGACTTGCCCGCAGTTGCTCAACCGGC-CCCTCGGCCGGTGCAC 251
||||||||| | ||||||||||| | | | ||| || || ||| || |||||||
Sbjct 34358 GGAAGCGCTCGTGACCAGACTTGCGCCGGGCGGATCATCCAGCGTTCTC-GCTGGTGCAC 34300
Query 252 TCTTCTGCGGTCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGC 311
|| | | ||||||||||||| | | || | ||| ||| || |||||| || ||
Sbjct 34299 TCCGCCCGGCTCAGGCCAGCATCGGTTTTCGCCGGGGGACAAAAGCTTCGGGAACGTAGC 34240
Query 312 CCCCTTCGGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCG 371
|| |||||| ||||||||||||| | | ||| | || || |||| |||| |||||
Sbjct 34239 TCCTCTCGGGGAGTGTTATAGCCCGTCGCGTAATAC-CCCGGCGGGGACCGAGGACCGCG 34181
Query 372 CTCCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGG 431
|| |||| ||||||||||||||||||| | |||| ||||||||| |||||||||| |||
Sbjct 34180 CTTCGGCAAGGATGCTGGCGTAATGGTCATCAGCGACCCGTCTTGAAACACGGACCGAGG 34121
Query 432 AGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGG 491
|||| | ||| ||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct 34120 AGTCAAGCATTAGTGCGAGTGTTTGGGTGTAAAACCCGCACGCGTAATGAAAGTGAACGT 34061
Query 492 AGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAG 551
||||| || | || ||| ||||||||||||||||||| ||||||||||||||||
Sbjct 34060 AGGTGAGA----GCTTCGGCGCATCATCGACCGATCCTGATGTTTTCGGATGGATTTGAG 34005
Query 552 TAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCA 611
|| |||||| | | ||||||||||||||||||||||| | |||||||||||||||||
Sbjct 34004 TAGGAGCATTAACGCTTGGACCCGAAAGATGGTGAACTATACTTGAATAGGGTGAAGCCA 33945
Query 612 GAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGG 671
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 33944 GAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGA 33885
Query 672 GTATAGGGGCGA 683
||||||||||||
Sbjct 33884 GTATAGGGGCGA 33873
Score = 257 bits (284), Expect = 7e-66
Identities = 161/172 (94%), Gaps = 1/172 (1%)
Strand=Plus/Minus
Query 14 GCCTAGCCG-TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATG 72
||| |||| ||| |||||||||||||||||||||| |||||||||||| ||||||||||
Sbjct 172 GCCGAGCCTCTGTAAAGCTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATG 113
Query 73 GGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGT 132
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 112 GGAGGTAAATTTCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGT 53
Query 133 GATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATT 184
|||||||||||||||||||||||| |||||| |||||| |||||||||||||
Sbjct 52 GATCGAAAGATGAAAAGCACTTTGAAAAGAGGGTTAAATAGCACGTGAAATT 1
>seq45
Length=5506958
Score = 100 bits (110), Expect = 1e-18
Identities = 122/166 (73%), Gaps = 4/166 (2%)
Strand=Plus/Minus
Query 466 CCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGA 525
|||| ||||||||||||||||||| ||||| || | |||||| ||||| ||||
Sbjct 354715 CCCGCACGCGTAATGAAAGTGAACGTAGGTGAGAGCTTC----GGTGCATCATCGGCCGA 354660
Query 526 TCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTG 585
|| | ||| ||| | || | ||| | | || | | | | || ||||| ||||||
Sbjct 354659 TCTGGGTGTTTTCAGCCCGACTGGAGCAGGGGCGTCGACGCTTGGGCCCGAGAGATGGAC 354600
Query 586 AACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGC 631
||| |||||||||||| |||| |||||||| ||| |||||||||
Sbjct 354599 GACTGGGCCTGAATAGGGCGAAGACAGAGGAAGCTCCGGTGGAGGC 354554
Score = 75.2 bits (82), Expect = 5e-11
Identities = 56/66 (85%), Gaps = 0/66 (0%)
Strand=Plus/Minus
Query 367 CCGCGCTCCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGAC 426
||||||| |||| ||||||||||||||| ||| | |||| ||||||||| |||| || |
Sbjct 354521 CCGCGCTTCGGCAAGGATGCTGGCGTAACGGTCATCAGCGACCCGTCTTGAAACAAGGGC 354462
Query 427 CAAGGA 432
||||||
Sbjct 354461 CAAGGA 354456
>seq1
Length=15654088
Score = 98.7 bits (108), Expect = 4e-18
Identities = 87/106 (82%), Gaps = 2/106 (2%)
Strand=Plus/Plus
Query 357 GGACTGAGGTCCGCGCTCCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTG 416
|||| |||| ||||||| |||| ||| || |||||||||||| | |||| |||| ||||
Sbjct 1281362 GGACCGAGGGCCGCGCTTCGGCAAGGGTGATGGCGTAATGGTCATCAGCGACCCGCCTTG 1281421
Query 417 GAACACGGACCAAGGAGTCTAACATCTA-TGCGAGTGTTTGGGTGT 461
|||||||| | ||||||| | || ||| ||||||||||||| |||
Sbjct 1281422 AAACACGGATCGAGGAGTCAAGCA-CTAGTGCGAGTGTTTGGCTGT 1281466
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079998284000
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