Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gaeumannomyces_20sp._20JS-464_20[genbank_20GCA_5F002197995.1_202017-
06-19] 80 sequences; 53,151,282 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq10 356 4e-96
seq16 84.2 3e-14
>seq10
Length=40229
Score = 356 bits (394), Expect = 4e-96
Identities = 241/266 (91%), Gaps = 3/266 (1%)
Strand=Plus/Plus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1186 ACTCGCTGGCTGTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 1245
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121
|||||||||||||||||||||||| |||| || ||| ||||||||||||||||||| ||
Sbjct 1246 CCTGTTATTGCCTCAAACTTCCATCGGCTTGA-GCCGATAGTCCCTCTAAGAAGCCTGCG 1304
Query 122 ACCAACCATAGTCGATG-GGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180
| ||| || ||| | |||||||||||||||||||||||||||||||||||| |||||
Sbjct 1305 CGCCGCCAAAG-CGACGCGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAATTA 1363
Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240
| ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct 1364 AGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAGA 1423
Query 241 AAGAGCTATCAATCTGTCCTCCCTCG 266
||||||| |||||||||| |||||
Sbjct 1424 AAGAGCTCTCAATCTGTCAATCCTCG 1449
Score = 356 bits (394), Expect = 4e-96
Identities = 241/266 (91%), Gaps = 3/266 (1%)
Strand=Plus/Plus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 8727 ACTCGCTGGCTGTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 8786
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121
|||||||||||||||||||||||| |||| || ||| ||||||||||||||||||| ||
Sbjct 8787 CCTGTTATTGCCTCAAACTTCCATCGGCTTGA-GCCGATAGTCCCTCTAAGAAGCCTGCG 8845
Query 122 ACCAACCATAGTCGATG-GGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180
| ||| || ||| | |||||||||||||||||||||||||||||||||||| |||||
Sbjct 8846 CGCCGCCAAAG-CGACGCGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAATTA 8904
Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240
| ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct 8905 AGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAGA 8964
Query 241 AAGAGCTATCAATCTGTCCTCCCTCG 266
||||||| |||||||||| |||||
Sbjct 8965 AAGAGCTCTCAATCTGTCAATCCTCG 8990
Score = 356 bits (394), Expect = 4e-96
Identities = 241/266 (91%), Gaps = 3/266 (1%)
Strand=Plus/Plus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 17949 ACTCGCTGGCTGTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 18008
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121
|||||||||||||||||||||||| |||| || ||| ||||||||||||||||||| ||
Sbjct 18009 CCTGTTATTGCCTCAAACTTCCATCGGCTTGA-GCCGATAGTCCCTCTAAGAAGCCTGCG 18067
Query 122 ACCAACCATAGTCGATG-GGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180
| ||| || ||| | |||||||||||||||||||||||||||||||||||| |||||
Sbjct 18068 CGCCGCCAAAG-CGACGCGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAATTA 18126
Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240
| ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct 18127 AGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAGA 18186
Query 241 AAGAGCTATCAATCTGTCCTCCCTCG 266
||||||| |||||||||| |||||
Sbjct 18187 AAGAGCTCTCAATCTGTCAATCCTCG 18212
Score = 356 bits (394), Expect = 4e-96
Identities = 241/266 (91%), Gaps = 3/266 (1%)
Strand=Plus/Plus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 35553 ACTCGCTGGCTGTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 35612
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121
|||||||||||||||||||||||| |||| || ||| ||||||||||||||||||| ||
Sbjct 35613 CCTGTTATTGCCTCAAACTTCCATCGGCTTGA-GCCGATAGTCCCTCTAAGAAGCCTGCG 35671
Query 122 ACCAACCATAGTCGATG-GGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180
| ||| || ||| | |||||||||||||||||||||||||||||||||||| |||||
Sbjct 35672 CGCCGCCAAAG-CGACGCGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAATTA 35730
Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240
| ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct 35731 AGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAGA 35790
Query 241 AAGAGCTATCAATCTGTCCTCCCTCG 266
||||||| |||||||||| |||||
Sbjct 35791 AAGAGCTCTCAATCTGTCAATCCTCG 35816
Score = 241 bits (266), Expect = 2e-61
Identities = 168/187 (90%), Gaps = 3/187 (2%)
Strand=Plus/Plus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 27172 ACTCGCTGGCTGTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 27231
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121
|||||||||||||||||||||||| |||| | |||| ||||||||||||||||||| ||
Sbjct 27232 CCTGTTATTGCCTCAAACTTCCATCGGCTTG-AGCCGATAGTCCCTCTAAGAAGCCTGCG 27290
Query 122 ACCAACCATAGTCGATG-GGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180
| ||| || ||| | |||||||||||||||||||||||||||||||||||| |||||
Sbjct 27291 CGCCGCCAAAG-CGACGCGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAATTA 27349
Query 181 ACCAGAC 187
| |||||
Sbjct 27350 AGCAGAC 27356
>seq16
Length=18714
Score = 84.2 bits (92), Expect = 3e-14
Identities = 197/266 (74%), Gaps = 41/266 (15%)
Strand=Plus/Minus
Query 21 GTAGCGCGCG-TGCGGCCCAGAACA-TC-TAAGGGCA-TCACAGACC----TGTTAT-TG 71
|||||||||| |||||||||||||| || |||||||| ||||||||| ||| | ||
Sbjct 4737 GTAGCGCGCGGTGCGGCCCAGAACAGTCGTAAGGGCAGTCACAGACCGTGGTGTAGTGTG 4678
Query 72 CC-TCAAACTT--CCATT-GGC-TGGAAGCCAA-TAG-TCCC-TC-TAAGAAGCCAGCCA 122
|| |||||| | ||| | ||| || |||| | ||| |||| || ||||||||| |
Sbjct 4677 CCGTCAAACGTGTCCAGTCGGCGTGTGAGCCGAGTAGGTCCCGTCGTAAGAAGCCGTGCG 4618
Query 123 C-CAACCATAGTCGATG-GGGC----TATTTAGCAGGTT---AAGGTC-TCGTTC----- 167
| | ||| || ||| | |||| | | ||||||| | | |||| ||| |
Sbjct 4617 CGCCGCCAAAG-CGACGCGGGCGTAGTGTGTAGCAGGGTGTAAGGGTCGTCGGTGTCGGT 4559
Query 168 GTTATCGGAATT--AACCAGACAAA-TCAC-TCCACCAAC-TAAGAACGGCCA-TGCACC 221
|| ||| || | || |||||||| |||| ||||||||| |||||||||||| ||||||
Sbjct 4558 GTAGTCGCAAGTGTAAGCAGACAAAGTCACGTCCACCAACGTAAGAACGGCCAGTGCACC 4499
Query 222 ACCACCCATAGAA-TCAAGAAAGAGC 246
|||||||| | || ||||||||||||
Sbjct 4498 ACCACCCACAAAAGTCAAGAAAGAGC 4473
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796799382480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |