Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gaeumannomyces_20sp._20JS-464_20[genbank_20GCA_5F002197995.1_202017- 06-19] 80 sequences; 53,151,282 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq10 497 2e-138 seq55 488 9e-136 seq80 158 2e-36 seq45 116 6e-24 seq16 96.9 6e-18 >seq10 Length=40229 Score = 497 bits (550), Expect = 2e-138 Identities = 288/295 (98%), Gaps = 1/295 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 |||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct 6639 TACTAAGCTCAATTACCATTGCGGCGA-GGTCATCAGTAGGGTAAAACTAACCTGTCTCA 6697 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6698 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 6757 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 6758 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTAT 6817 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6818 GAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 6877 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6878 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 6932 Score = 497 bits (550), Expect = 2e-138 Identities = 288/295 (98%), Gaps = 1/295 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 |||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct 14183 TACTAAGCTCAATTACCATTGCGGCGA-GGTCATCAGTAGGGTAAAACTAACCTGTCTCA 14241 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 14242 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 14301 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 14302 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTAT 14361 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 14362 GAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 14421 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 14422 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 14476 Score = 497 bits (550), Expect = 2e-138 Identities = 288/295 (98%), Gaps = 1/295 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 |||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct 23402 TACTAAGCTCAATTACCATTGCGGCGA-GGTCATCAGTAGGGTAAAACTAACCTGTCTCA 23460 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 23461 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 23520 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 23521 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTAT 23580 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 23581 GAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 23640 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 23641 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 23695 Score = 497 bits (550), Expect = 2e-138 Identities = 288/295 (98%), Gaps = 1/295 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 |||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct 31787 TACTAAGCTCAATTACCATTGCGGCGA-GGTCATCAGTAGGGTAAAACTAACCTGTCTCA 31845 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 31846 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 31905 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 31906 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTAT 31965 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 31966 GAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 32025 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 32026 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 32080 >seq55 Length=2475 Score = 488 bits (540), Expect = 9e-136 Identities = 285/295 (97%), Gaps = 0/295 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 |||||| |||||||| ||| |||||| |||||||||||||||||||||||||||||| Sbjct 1144 TACTAAATTGAATTACCGTTGCGGCGACCTTCATCAGTAGGGTAAAACTAACCTGTCTCA 1203 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1204 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 1263 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 1264 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTAT 1323 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1324 GAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 1383 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1384 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 1438 >seq80 Length=1186762 Score = 158 bits (174), Expect = 2e-36 Identities = 93/97 (96%), Gaps = 0/97 (0%) Strand=Plus/Minus Query 199 AGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAA 258 |||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 928499 AGCCCTTCATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAA 928440 Query 259 AGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 ||||| ||||||||||||||||||||||||||||||| Sbjct 928439 AGGATAGATAGGCCACACTTTCATGGTTTGTATTCAC 928403 Score = 122 bits (134), Expect = 1e-25 Identities = 72/75 (96%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 132 GTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGC 191 ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| Sbjct 928978 GTATGATAGGAAGAGCCAACATCGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGC 928919 Query 192 TGCCACAAGCCAGTT 206 |||||||||||||| Sbjct 928918 CGCCACAAGCCAGTT 928904 >seq45 Length=5506958 Score = 116 bits (128), Expect = 6e-24 Identities = 81/92 (88%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 47 ACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAAT 106 ||| ||| | |||| | ||||||||| |||||| ||| || ||||||||||||||||||| Sbjct 734200 ACTGACCCGCCTCACGCCGGTCTAAAGCCAGCTGACGCTCTCTATTAGTGGGTGAACAAT 734141 Query 107 CCAACGCTTACCGAATTCTGCTTCGGTATGAT 138 ||| ||||||| |||||||||||||||||||| Sbjct 734140 CCAGCGCTTACTGAATTCTGCTTCGGTATGAT 734109 >seq16 Length=18714 Score = 96.9 bits (106), Expect = 6e-18 Identities = 227/308 (74%), Gaps = 51/308 (17%) Strand=Plus/Minus Query 20 TGGGGCGACGGTCA-TCAG-TAGGG-TAAAAC-TAACCT--GTC-TCATGACGG-TC-TA 70 || ||||| ||||| |||| ||||| |||||| ||||| ||| ||| ||||| || || Sbjct 9392 TGCGGCGAGGGTCAGTCAGGTAGGGGTAAAACGTAACCGTGGTCGTCACGACGGGTCGTA 9333 Query 71 AACCCAGC-TCACGTTCCCTATTAGTG-------GGTGAACAA-TCCAACGCTT--ACCG 119 |||||||| ||||| | | ||||| ||||||||| |||||||| | |||| Sbjct 9332 AACCCAGCGTCACGGTGTCCCGTAGTGTAGGTGGGGTGAACAAGTCCAACGCGTGTACCG 9273 Query 120 AATTCTGCTTCG------GTA-TGA-TAGGAAGAGCCGACA-TCGAAGGA-TCAAAAAGC 169 || | | | || ||| ||| ||||||||||||||| |||||||| ||||||||| Sbjct 9272 AAGTGTCGTGCGTGTCGGGTAGTGAGTAGGAAGAGCCGACAGTCGAAGGAGTCAAAAAGC 9213 Query 170 AAC-GTCGC-TA-TGAACGC--TTGGCTGCCACAAGCCAGTTAT----CCCTG--TGGTA 218 || ||||| || ||||||| |||| |||||||||||| | | || || |||| Sbjct 9212 GACGGTCGCGTAGTGAACGCGTGTGGCCGCCACAAGCCAGGTGTAGTCCCGTGGTGGGTA 9153 Query 219 AC---TTTTCTGGCACC-TC-TAGCC-TCAAA-TTTCGAGGGAC-TAAAGGA-TCGA-TA 268 || | | ||||||| || ||||| ||||| | | ||||| ||||||| |||| || Sbjct 9152 ACGTGTGTCGTGGCACCGTCGTAGCCGTCAAAGTGTGTCGGGACGTAAAGGAGTCGAGTA 9093 Query 269 GGCCACAC 276 |||||||| Sbjct 9092 GGCCACAC 9085 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854399316480