Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gaeumannomyces_20sp._20JS-464_20[genbank_20GCA_5F002197995.1_202017-
06-19] 80 sequences; 53,151,282 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq10 497 2e-138
seq55 488 9e-136
seq80 158 2e-36
seq45 116 6e-24
seq16 96.9 6e-18
>seq10
Length=40229
Score = 497 bits (550), Expect = 2e-138
Identities = 288/295 (98%), Gaps = 1/295 (0%)
Strand=Plus/Plus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
|||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct 6639 TACTAAGCTCAATTACCATTGCGGCGA-GGTCATCAGTAGGGTAAAACTAACCTGTCTCA 6697
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 6698 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 6757
Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 6758 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTAT 6817
Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 6818 GAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 6877
Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 6878 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 6932
Score = 497 bits (550), Expect = 2e-138
Identities = 288/295 (98%), Gaps = 1/295 (0%)
Strand=Plus/Plus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
|||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct 14183 TACTAAGCTCAATTACCATTGCGGCGA-GGTCATCAGTAGGGTAAAACTAACCTGTCTCA 14241
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 14242 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 14301
Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 14302 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTAT 14361
Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 14362 GAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 14421
Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 14422 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 14476
Score = 497 bits (550), Expect = 2e-138
Identities = 288/295 (98%), Gaps = 1/295 (0%)
Strand=Plus/Plus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
|||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct 23402 TACTAAGCTCAATTACCATTGCGGCGA-GGTCATCAGTAGGGTAAAACTAACCTGTCTCA 23460
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 23461 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 23520
Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 23521 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTAT 23580
Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 23581 GAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 23640
Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 23641 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 23695
Score = 497 bits (550), Expect = 2e-138
Identities = 288/295 (98%), Gaps = 1/295 (0%)
Strand=Plus/Plus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
|||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct 31787 TACTAAGCTCAATTACCATTGCGGCGA-GGTCATCAGTAGGGTAAAACTAACCTGTCTCA 31845
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 31846 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 31905
Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 31906 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTAT 31965
Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 31966 GAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 32025
Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 32026 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 32080
>seq55
Length=2475
Score = 488 bits (540), Expect = 9e-136
Identities = 285/295 (97%), Gaps = 0/295 (0%)
Strand=Plus/Plus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
|||||| |||||||| ||| |||||| ||||||||||||||||||||||||||||||
Sbjct 1144 TACTAAATTGAATTACCGTTGCGGCGACCTTCATCAGTAGGGTAAAACTAACCTGTCTCA 1203
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1204 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 1263
Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1264 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTAT 1323
Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1324 GAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 1383
Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1384 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 1438
>seq80
Length=1186762
Score = 158 bits (174), Expect = 2e-36
Identities = 93/97 (96%), Gaps = 0/97 (0%)
Strand=Plus/Minus
Query 199 AGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAA 258
|||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 928499 AGCCCTTCATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAA 928440
Query 259 AGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295
||||| |||||||||||||||||||||||||||||||
Sbjct 928439 AGGATAGATAGGCCACACTTTCATGGTTTGTATTCAC 928403
Score = 122 bits (134), Expect = 1e-25
Identities = 72/75 (96%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 132 GTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGC 191
||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||
Sbjct 928978 GTATGATAGGAAGAGCCAACATCGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGC 928919
Query 192 TGCCACAAGCCAGTT 206
||||||||||||||
Sbjct 928918 CGCCACAAGCCAGTT 928904
>seq45
Length=5506958
Score = 116 bits (128), Expect = 6e-24
Identities = 81/92 (88%), Gaps = 0/92 (0%)
Strand=Plus/Minus
Query 47 ACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAAT 106
||| ||| | |||| | ||||||||| |||||| ||| || |||||||||||||||||||
Sbjct 734200 ACTGACCCGCCTCACGCCGGTCTAAAGCCAGCTGACGCTCTCTATTAGTGGGTGAACAAT 734141
Query 107 CCAACGCTTACCGAATTCTGCTTCGGTATGAT 138
||| ||||||| ||||||||||||||||||||
Sbjct 734140 CCAGCGCTTACTGAATTCTGCTTCGGTATGAT 734109
>seq16
Length=18714
Score = 96.9 bits (106), Expect = 6e-18
Identities = 227/308 (74%), Gaps = 51/308 (17%)
Strand=Plus/Minus
Query 20 TGGGGCGACGGTCA-TCAG-TAGGG-TAAAAC-TAACCT--GTC-TCATGACGG-TC-TA 70
|| ||||| ||||| |||| ||||| |||||| ||||| ||| ||| ||||| || ||
Sbjct 9392 TGCGGCGAGGGTCAGTCAGGTAGGGGTAAAACGTAACCGTGGTCGTCACGACGGGTCGTA 9333
Query 71 AACCCAGC-TCACGTTCCCTATTAGTG-------GGTGAACAA-TCCAACGCTT--ACCG 119
|||||||| ||||| | | ||||| ||||||||| |||||||| | ||||
Sbjct 9332 AACCCAGCGTCACGGTGTCCCGTAGTGTAGGTGGGGTGAACAAGTCCAACGCGTGTACCG 9273
Query 120 AATTCTGCTTCG------GTA-TGA-TAGGAAGAGCCGACA-TCGAAGGA-TCAAAAAGC 169
|| | | | || ||| ||| ||||||||||||||| |||||||| |||||||||
Sbjct 9272 AAGTGTCGTGCGTGTCGGGTAGTGAGTAGGAAGAGCCGACAGTCGAAGGAGTCAAAAAGC 9213
Query 170 AAC-GTCGC-TA-TGAACGC--TTGGCTGCCACAAGCCAGTTAT----CCCTG--TGGTA 218
|| ||||| || ||||||| |||| |||||||||||| | | || || ||||
Sbjct 9212 GACGGTCGCGTAGTGAACGCGTGTGGCCGCCACAAGCCAGGTGTAGTCCCGTGGTGGGTA 9153
Query 219 AC---TTTTCTGGCACC-TC-TAGCC-TCAAA-TTTCGAGGGAC-TAAAGGA-TCGA-TA 268
|| | | ||||||| || ||||| ||||| | | ||||| ||||||| |||| ||
Sbjct 9152 ACGTGTGTCGTGGCACCGTCGTAGCCGTCAAAGTGTGTCGGGACGTAAAGGAGTCGAGTA 9093
Query 269 GGCCACAC 276
||||||||
Sbjct 9092 GGCCACAC 9085
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854399316480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |