Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gaeumannomyces_20sp._20JS-464_20[genbank_20GCA_5F002197995.1_202017- 06-19] 80 sequences; 53,151,282 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq10 96.9 2e-18 >seq10 Length=40229 Score = 96.9 bits (106), Expect = 2e-18 Identities = 76/86 (88%), Gaps = 4/86 (5%) Strand=Plus/Plus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | |||||| |||| || || ||||||||| ||||||||||| |||||||||| Sbjct 994 TCCGAAGGC-CTCACTGAGCCGTT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 1050 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||||| ||||||||||| Sbjct 1051 GGCAGGGACGTAAT-CAACGCAAGCT 1075 Score = 96.9 bits (106), Expect = 2e-18 Identities = 76/86 (88%), Gaps = 4/86 (5%) Strand=Plus/Plus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | |||||| |||| || || ||||||||| ||||||||||| |||||||||| Sbjct 8535 TCCGAAGGC-CTCACTGAGCCGTT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 8591 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||||| ||||||||||| Sbjct 8592 GGCAGGGACGTAAT-CAACGCAAGCT 8616 Score = 96.9 bits (106), Expect = 2e-18 Identities = 76/86 (88%), Gaps = 4/86 (5%) Strand=Plus/Plus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | |||||| |||| || || ||||||||| ||||||||||| |||||||||| Sbjct 17757 TCCGAAGGC-CTCACTGAGCCGTT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 17813 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||||| ||||||||||| Sbjct 17814 GGCAGGGACGTAAT-CAACGCAAGCT 17838 Score = 96.9 bits (106), Expect = 2e-18 Identities = 76/86 (88%), Gaps = 4/86 (5%) Strand=Plus/Plus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | |||||| |||| || || ||||||||| ||||||||||| |||||||||| Sbjct 26980 TCCGAAGGC-CTCACTGAGCCGTT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 27036 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||||| ||||||||||| Sbjct 27037 GGCAGGGACGTAAT-CAACGCAAGCT 27061 Score = 96.9 bits (106), Expect = 2e-18 Identities = 76/86 (88%), Gaps = 4/86 (5%) Strand=Plus/Plus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | |||||| |||| || || ||||||||| ||||||||||| |||||||||| Sbjct 35361 TCCGAAGGC-CTCACTGAGCCGTT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 35417 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||||| ||||||||||| Sbjct 35418 GGCAGGGACGTAAT-CAACGCAAGCT 35442 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300799774400