Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gaeumannomyces_20sp._20JS-464_20[genbank_20GCA_5F002197995.1_202017-
06-19] 80 sequences; 53,151,282 total letters
Query= AAMG01001634.1
Length=217
Score E
Sequences producing significant alignments: (Bits) Value
seq10 176 5e-42
>seq10
Length=40229
Score = 176 bits (194), Expect = 5e-42
Identities = 157/193 (81%), Gaps = 4/193 (2%)
Strand=Plus/Plus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct 2202 CTAGAAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAATGTATTCG 2261
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125
|| || |||||||||||||||||||||||| |||| ||||||||||||||||| | ||
Sbjct 2262 AGCATAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGGTTCCCCGCCA 2321
Query 126 CACCAATGAA--GGCATACGGGCTCACCA-AGAGGTAGGGCTGGGTAATGCAGTACTCGC 182
| || | || ||||| |||||| ||| || | ||| | || |||| | |||
Sbjct 2322 CGCCCAGTAAAGGGCAT-GGGGCTCCCCAGAGGGAAAGGCCCGGCCGGACCAGTGCACGC 2380
Query 183 CGTGAGGCGGACC 195
||||||||||||
Sbjct 2381 GGTGAGGCGGACC 2393
Score = 176 bits (194), Expect = 5e-42
Identities = 157/193 (81%), Gaps = 4/193 (2%)
Strand=Plus/Plus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct 9744 CTAGAAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAATGTATTCG 9803
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125
|| || |||||||||||||||||||||||| |||| ||||||||||||||||| | ||
Sbjct 9804 AGCATAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGGTTCCCCGCCA 9863
Query 126 CACCAATGAA--GGCATACGGGCTCACCA-AGAGGTAGGGCTGGGTAATGCAGTACTCGC 182
| || | || ||||| |||||| ||| || | ||| | || |||| | |||
Sbjct 9864 CGCCCAGTAAAGGGCAT-GGGGCTCCCCAGAGGGAAAGGCCCGGCCGGACCAGTGCACGC 9922
Query 183 CGTGAGGCGGACC 195
||||||||||||
Sbjct 9923 GGTGAGGCGGACC 9935
Score = 176 bits (194), Expect = 5e-42
Identities = 157/193 (81%), Gaps = 4/193 (2%)
Strand=Plus/Plus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct 18965 CTAGAAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAATGTATTCG 19024
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125
|| || |||||||||||||||||||||||| |||| ||||||||||||||||| | ||
Sbjct 19025 AGCATAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGGTTCCCCGCCA 19084
Query 126 CACCAATGAA--GGCATACGGGCTCACCA-AGAGGTAGGGCTGGGTAATGCAGTACTCGC 182
| || | || ||||| |||||| ||| || | ||| | || |||| | |||
Sbjct 19085 CGCCCAGTAAAGGGCAT-GGGGCTCCCCAGAGGGAAAGGCCCGGCCGGACCAGTGCACGC 19143
Query 183 CGTGAGGCGGACC 195
||||||||||||
Sbjct 19144 GGTGAGGCGGACC 19156
Score = 176 bits (194), Expect = 5e-42
Identities = 157/193 (81%), Gaps = 4/193 (2%)
Strand=Plus/Plus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct 36569 CTAGAAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAATGTATTCG 36628
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125
|| || |||||||||||||||||||||||| |||| ||||||||||||||||| | ||
Sbjct 36629 AGCATAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGGTTCCCCGCCA 36688
Query 126 CACCAATGAA--GGCATACGGGCTCACCA-AGAGGTAGGGCTGGGTAATGCAGTACTCGC 182
| || | || ||||| |||||| ||| || | ||| | || |||| | |||
Sbjct 36689 CGCCCAGTAAAGGGCAT-GGGGCTCCCCAGAGGGAAAGGCCCGGCCGGACCAGTGCACGC 36747
Query 183 CGTGAGGCGGACC 195
||||||||||||
Sbjct 36748 GGTGAGGCGGACC 36760
Score = 161 bits (178), Expect = 1e-37
Identities = 149/185 (81%), Gaps = 4/185 (2%)
Strand=Plus/Plus
Query 14 CAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCGTAAG 73
||||||||||| | |||||||||||||||||||||||||||||||||||| || || |
Sbjct 27358 CAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAATGTATTCGAGCATAGG 27417
Query 74 CCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCACACCAATG 133
||||||||||||||||||||||| |||| ||||||||||||||||| | ||| || |
Sbjct 27418 CCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGGTTCCCCGCCACGCCCAGT 27477
Query 134 AA--GGCATACGGGCTCACCA-AGAGGTAGGGCTGGGTAATGCAGTACTCGCCGTGAGGC 190
|| ||||| |||||| ||| || | ||| | || |||| | ||| |||||||
Sbjct 27478 AAAGGGCAT-GGGGCTCCCCAGAGGGAAAGGCCCGGCCGGACCAGTGCACGCGGTGAGGC 27536
Query 191 GGACC 195
|||||
Sbjct 27537 GGACC 27541
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595199538720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |