Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gaeumannomyces_20sp._20JS-464_20[genbank_20GCA_5F002197995.1_202017- 06-19] 80 sequences; 53,151,282 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq10 176 5e-42 >seq10 Length=40229 Score = 176 bits (194), Expect = 5e-42 Identities = 157/193 (81%), Gaps = 4/193 (2%) Strand=Plus/Plus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct 2202 CTAGAAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAATGTATTCG 2261 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125 || || |||||||||||||||||||||||| |||| ||||||||||||||||| | || Sbjct 2262 AGCATAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGGTTCCCCGCCA 2321 Query 126 CACCAATGAA--GGCATACGGGCTCACCA-AGAGGTAGGGCTGGGTAATGCAGTACTCGC 182 | || | || ||||| |||||| ||| || | ||| | || |||| | ||| Sbjct 2322 CGCCCAGTAAAGGGCAT-GGGGCTCCCCAGAGGGAAAGGCCCGGCCGGACCAGTGCACGC 2380 Query 183 CGTGAGGCGGACC 195 |||||||||||| Sbjct 2381 GGTGAGGCGGACC 2393 Score = 176 bits (194), Expect = 5e-42 Identities = 157/193 (81%), Gaps = 4/193 (2%) Strand=Plus/Plus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct 9744 CTAGAAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAATGTATTCG 9803 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125 || || |||||||||||||||||||||||| |||| ||||||||||||||||| | || Sbjct 9804 AGCATAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGGTTCCCCGCCA 9863 Query 126 CACCAATGAA--GGCATACGGGCTCACCA-AGAGGTAGGGCTGGGTAATGCAGTACTCGC 182 | || | || ||||| |||||| ||| || | ||| | || |||| | ||| Sbjct 9864 CGCCCAGTAAAGGGCAT-GGGGCTCCCCAGAGGGAAAGGCCCGGCCGGACCAGTGCACGC 9922 Query 183 CGTGAGGCGGACC 195 |||||||||||| Sbjct 9923 GGTGAGGCGGACC 9935 Score = 176 bits (194), Expect = 5e-42 Identities = 157/193 (81%), Gaps = 4/193 (2%) Strand=Plus/Plus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct 18965 CTAGAAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAATGTATTCG 19024 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125 || || |||||||||||||||||||||||| |||| ||||||||||||||||| | || Sbjct 19025 AGCATAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGGTTCCCCGCCA 19084 Query 126 CACCAATGAA--GGCATACGGGCTCACCA-AGAGGTAGGGCTGGGTAATGCAGTACTCGC 182 | || | || ||||| |||||| ||| || | ||| | || |||| | ||| Sbjct 19085 CGCCCAGTAAAGGGCAT-GGGGCTCCCCAGAGGGAAAGGCCCGGCCGGACCAGTGCACGC 19143 Query 183 CGTGAGGCGGACC 195 |||||||||||| Sbjct 19144 GGTGAGGCGGACC 19156 Score = 176 bits (194), Expect = 5e-42 Identities = 157/193 (81%), Gaps = 4/193 (2%) Strand=Plus/Plus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct 36569 CTAGAAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAATGTATTCG 36628 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125 || || |||||||||||||||||||||||| |||| ||||||||||||||||| | || Sbjct 36629 AGCATAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGGTTCCCCGCCA 36688 Query 126 CACCAATGAA--GGCATACGGGCTCACCA-AGAGGTAGGGCTGGGTAATGCAGTACTCGC 182 | || | || ||||| |||||| ||| || | ||| | || |||| | ||| Sbjct 36689 CGCCCAGTAAAGGGCAT-GGGGCTCCCCAGAGGGAAAGGCCCGGCCGGACCAGTGCACGC 36747 Query 183 CGTGAGGCGGACC 195 |||||||||||| Sbjct 36748 GGTGAGGCGGACC 36760 Score = 161 bits (178), Expect = 1e-37 Identities = 149/185 (81%), Gaps = 4/185 (2%) Strand=Plus/Plus Query 14 CAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCGTAAG 73 ||||||||||| | |||||||||||||||||||||||||||||||||||| || || | Sbjct 27358 CAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAATGTATTCGAGCATAGG 27417 Query 74 CCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCACACCAATG 133 ||||||||||||||||||||||| |||| ||||||||||||||||| | ||| || | Sbjct 27418 CCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGGTTCCCCGCCACGCCCAGT 27477 Query 134 AA--GGCATACGGGCTCACCA-AGAGGTAGGGCTGGGTAATGCAGTACTCGCCGTGAGGC 190 || ||||| |||||| ||| || | ||| | || |||| | ||| ||||||| Sbjct 27478 AAAGGGCAT-GGGGCTCCCCAGAGGGAAAGGCCCGGCCGGACCAGTGCACGCGGTGAGGC 27536 Query 191 GGACC 195 ||||| Sbjct 27537 GGACC 27541 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595199538720