Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gaeumannomyces_20sp._20JS-464_20[genbank_20GCA_5F002197995.1_202017-
06-19] 80 sequences; 53,151,282 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq55 295 1e-77
seq10 241 2e-61
>seq55
Length=2475
Score = 295 bits (326), Expect = 1e-77
Identities = 240/282 (85%), Gaps = 8/282 (3%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| || |||||| |||||||||||||||||||||||||||||||||
Sbjct 1146 GTACGAGAGGAACCGTTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 1089
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||| |||||||||||| |||| |||||||||||||||||||||||||||| ||||
Sbjct 1088 GCCGCGACGCTACCATCTGCCGGATAATGGCTGAACGCCTCTAAGTCAGAATCCGTGCCG 1029
Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTC--GGCCCCGA 178
||||| || ||| | || |||| ||||||| |||||||||||||| || |||| |||
Sbjct 1028 GAACGCGGCGATGTTGCCCCGCACGTCGTAGTTGGATACGAATAGGCCTCCGGGCCACGA 969
Query 179 ACCTTAGCAGGCCGGCAACGGGCGTCCCGCG-GAAG-CGCGGGGCGCTCAGCTGGCGGAT 236
|||| ||||||| ||| || ||| |||| | |||| | ||||| ||| ||||||||||
Sbjct 968 ACCTCAGCAGGCTGGCGAC-GGCTCCCCGGGAGAAGCCCCGGGGAGCT-GGCTGGCGGAT 911
Query 237 TGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
|||||| ||||| |||| ||||| |||||| |||| |||||
Sbjct 910 TGCAATGTCACCTCGCGCGGGGATGAATCCTCTGCATACGAC 869
>seq10
Length=40229
Score = 241 bits (266), Expect = 2e-61
Identities = 225/278 (81%), Gaps = 6/278 (2%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| | |||||| |||||||||||||||| |||| ||| ||||||
Sbjct 6641 GTACGAGAGGAACCGCTCA-TTCAGA-TAATTGGTTTTTGCGGTTGTCCGACAGGGCAGT 6584
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
|||||||||||||||||||| |||| | ||||||||||||||||||| |||||| |||||
Sbjct 6583 GCCGCGAAGCTACCATCTGCAGGATAACGGCTGAACGCCTCTAAGTCGGAATCCTTGCCA 6524
Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180
||||| |||||| | |||| |||| | ||| |||||| ||||||||| ||||| || |
Sbjct 6523 GAACGCGGTGATAC-CTCCCGCACGT-TTAGACGGATAAGAATAGGCTCCGGCCTCGTAT 6466
Query 181 CTTAGCAGGCCGGCAACGGGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGATTGCA 240
|| ||||||| || | || || | |||||| |||| | | | ||| |||| |
Sbjct 6465 CTCAGCAGGCGAACATCCCGCCGGCCTC-GAAGCGGCCGGCGGTGA-TTCGCGTATTGTA 6408
Query 241 ATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
||||| || |||| ||| |||||||||||||||||||
Sbjct 6407 ATTTCGACACGCGCGGGGTTAAATCCTTTGCAGACGAC 6370
Score = 241 bits (266), Expect = 2e-61
Identities = 225/278 (81%), Gaps = 6/278 (2%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| | |||||| |||||||||||||||| |||| ||| ||||||
Sbjct 14185 GTACGAGAGGAACCGCTCA-TTCAGA-TAATTGGTTTTTGCGGTTGTCCGACAGGGCAGT 14128
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
|||||||||||||||||||| |||| | ||||||||||||||||||| |||||| |||||
Sbjct 14127 GCCGCGAAGCTACCATCTGCAGGATAACGGCTGAACGCCTCTAAGTCGGAATCCTTGCCA 14068
Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180
||||| |||||| | |||| |||| | ||| |||||| ||||||||| ||||| || |
Sbjct 14067 GAACGCGGTGATAC-CTCCCGCACGT-TTAGACGGATAAGAATAGGCTCCGGCCTCGTAT 14010
Query 181 CTTAGCAGGCCGGCAACGGGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGATTGCA 240
|| ||||||| || | || || | |||||| |||| | | | ||| |||| |
Sbjct 14009 CTCAGCAGGCGAACATCCCGCCGGCCTC-GAAGCGGCCGGCGGTGA-TTCGCGTATTGTA 13952
Query 241 ATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
||||| || |||| ||| |||||||||||||||||||
Sbjct 13951 ATTTCGACACGCGCGGGGTTAAATCCTTTGCAGACGAC 13914
Score = 241 bits (266), Expect = 2e-61
Identities = 225/278 (81%), Gaps = 6/278 (2%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| | |||||| |||||||||||||||| |||| ||| ||||||
Sbjct 23404 GTACGAGAGGAACCGCTCA-TTCAGA-TAATTGGTTTTTGCGGTTGTCCGACAGGGCAGT 23347
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
|||||||||||||||||||| |||| | ||||||||||||||||||| |||||| |||||
Sbjct 23346 GCCGCGAAGCTACCATCTGCAGGATAACGGCTGAACGCCTCTAAGTCGGAATCCTTGCCA 23287
Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180
||||| |||||| | |||| |||| | ||| |||||| ||||||||| ||||| || |
Sbjct 23286 GAACGCGGTGATAC-CTCCCGCACGT-TTAGACGGATAAGAATAGGCTCCGGCCTCGTAT 23229
Query 181 CTTAGCAGGCCGGCAACGGGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGATTGCA 240
|| ||||||| || | || || | |||||| |||| | | | ||| |||| |
Sbjct 23228 CTCAGCAGGCGAACATCCCGCCGGCCTC-GAAGCGGCCGGCGGTGA-TTCGCGTATTGTA 23171
Query 241 ATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
||||| || |||| ||| |||||||||||||||||||
Sbjct 23170 ATTTCGACACGCGCGGGGTTAAATCCTTTGCAGACGAC 23133
Score = 241 bits (266), Expect = 2e-61
Identities = 225/278 (81%), Gaps = 6/278 (2%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| | |||||| |||||||||||||||| |||| ||| ||||||
Sbjct 31789 GTACGAGAGGAACCGCTCA-TTCAGA-TAATTGGTTTTTGCGGTTGTCCGACAGGGCAGT 31732
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
|||||||||||||||||||| |||| | ||||||||||||||||||| |||||| |||||
Sbjct 31731 GCCGCGAAGCTACCATCTGCAGGATAACGGCTGAACGCCTCTAAGTCGGAATCCTTGCCA 31672
Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180
||||| |||||| | |||| |||| | ||| |||||| ||||||||| ||||| || |
Sbjct 31671 GAACGCGGTGATAC-CTCCCGCACGT-TTAGACGGATAAGAATAGGCTCCGGCCTCGTAT 31614
Query 181 CTTAGCAGGCCGGCAACGGGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGATTGCA 240
|| ||||||| || | || || | |||||| |||| | | | ||| |||| |
Sbjct 31613 CTCAGCAGGCGAACATCCCGCCGGCCTC-GAAGCGGCCGGCGGTGA-TTCGCGTATTGTA 31556
Query 241 ATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
||||| || |||| ||| |||||||||||||||||||
Sbjct 31555 ATTTCGACACGCGCGGGGTTAAATCCTTTGCAGACGAC 31518
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819199365120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |