Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gaeumannomyces_20sp._20JS-464_20[genbank_20GCA_5F002197995.1_202017- 06-19] 80 sequences; 53,151,282 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq10 708 0.0 seq45 80.6 8e-13 >seq10 Length=40229 Score = 708 bits (784), Expect = 0.0 Identities = 460/504 (91%), Gaps = 1/504 (0%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| Sbjct 2529 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTCTCGTCACTACCT 2588 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 | ||||||||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct 2589 CGCCGTGTCGGCATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTAAACGCCGTT 2648 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||| ||||||| |||| |||||| | ||||||||||||| |||| || Sbjct 2649 TCTCAGGCGTTTTCTCCGGGGTCGAGCCCTAACCCTCCGTTACCCGTTGTCACCACGGCT 2708 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 ||||| | || || ||||||||||||||||||||||||||||||||||||||||||| Sbjct 2709 GGCCAAGACCCAGCCGTCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCG 2768 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 ||||||| ||||||||| ||||||| ||||||||||| |||||||| ||||| |||| Sbjct 2769 CAAGGCCGTGCGATTCGAGAAGTTATCATGAATCACCAGTGAGCCCCGGAGGGCATTGGC 2828 Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360 |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 2829 TTTTAATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTCAGCATGTATTAGCTCTAG 2888 Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2889 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 2948 Query 421 GCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 480 ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| Sbjct 2949 GCCATTCGCAGTTTCGCTGTATA-ATTGCTTATACTTAGACATGCATGGCTTAATCTTTA 3007 Query 481 AGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||| Sbjct 3008 AGACAAGCATATGACTACTGGCAG 3031 Score = 708 bits (784), Expect = 0.0 Identities = 460/504 (91%), Gaps = 1/504 (0%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| Sbjct 10071 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTCTCGTCACTACCT 10130 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 | ||||||||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct 10131 CGCCGTGTCGGCATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTAAACGCCGTT 10190 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||| ||||||| |||| |||||| | ||||||||||||| |||| || Sbjct 10191 TCTCAGGCGTTTTCTCCGGGGTCGAGCCCTAACCCTCCGTTACCCGTTGTCACCACGGCT 10250 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 ||||| | || || ||||||||||||||||||||||||||||||||||||||||||| Sbjct 10251 GGCCAAGACCCAGCCGTCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCG 10310 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 ||||||| ||||||||| ||||||| ||||||||||| |||||||| ||||| |||| Sbjct 10311 CAAGGCCGTGCGATTCGAGAAGTTATCATGAATCACCAGTGAGCCCCGGAGGGCATTGGC 10370 Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360 |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 10371 TTTTAATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTCAGCATGTATTAGCTCTAG 10430 Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 10431 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 10490 Query 421 GCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 480 ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| Sbjct 10491 GCCATTCGCAGTTTCGCTGTATA-ATTGCTTATACTTAGACATGCATGGCTTAATCTTTA 10549 Query 481 AGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||| Sbjct 10550 AGACAAGCATATGACTACTGGCAG 10573 Score = 708 bits (784), Expect = 0.0 Identities = 460/504 (91%), Gaps = 1/504 (0%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| Sbjct 19292 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTCTCGTCACTACCT 19351 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 | ||||||||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct 19352 CGCCGTGTCGGCATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTAAACGCCGTT 19411 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||| ||||||| |||| |||||| | ||||||||||||| |||| || Sbjct 19412 TCTCAGGCGTTTTCTCCGGGGTCGAGCCCTAACCCTCCGTTACCCGTTGTCACCACGGCT 19471 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 ||||| | || || ||||||||||||||||||||||||||||||||||||||||||| Sbjct 19472 GGCCAAGACCCAGCCGTCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCG 19531 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 ||||||| ||||||||| ||||||| ||||||||||| |||||||| ||||| |||| Sbjct 19532 CAAGGCCGTGCGATTCGAGAAGTTATCATGAATCACCAGTGAGCCCCGGAGGGCATTGGC 19591 Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360 |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 19592 TTTTAATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTCAGCATGTATTAGCTCTAG 19651 Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 19652 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 19711 Query 421 GCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 480 ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| Sbjct 19712 GCCATTCGCAGTTTCGCTGTATA-ATTGCTTATACTTAGACATGCATGGCTTAATCTTTA 19770 Query 481 AGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||| Sbjct 19771 AGACAAGCATATGACTACTGGCAG 19794 Score = 708 bits (784), Expect = 0.0 Identities = 460/504 (91%), Gaps = 1/504 (0%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| Sbjct 27677 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTCTCGTCACTACCT 27736 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 | ||||||||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct 27737 CGCCGTGTCGGCATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTAAACGCCGTT 27796 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||| ||||||| |||| |||||| | ||||||||||||| |||| || Sbjct 27797 TCTCAGGCGTTTTCTCCGGGGTCGAGCCCTAACCCTCCGTTACCCGTTGTCACCACGGCT 27856 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 ||||| | || || ||||||||||||||||||||||||||||||||||||||||||| Sbjct 27857 GGCCAAGACCCAGCCGTCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCG 27916 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 ||||||| ||||||||| ||||||| ||||||||||| |||||||| ||||| |||| Sbjct 27917 CAAGGCCGTGCGATTCGAGAAGTTATCATGAATCACCAGTGAGCCCCGGAGGGCATTGGC 27976 Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360 |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 27977 TTTTAATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTCAGCATGTATTAGCTCTAG 28036 Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 28037 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 28096 Query 421 GCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 480 ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| Sbjct 28097 GCCATTCGCAGTTTCGCTGTATA-ATTGCTTATACTTAGACATGCATGGCTTAATCTTTA 28155 Query 481 AGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||| Sbjct 28156 AGACAAGCATATGACTACTGGCAG 28179 Score = 708 bits (784), Expect = 0.0 Identities = 460/504 (91%), Gaps = 1/504 (0%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| Sbjct 36896 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTCTCGTCACTACCT 36955 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 | ||||||||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct 36956 CGCCGTGTCGGCATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTAAACGCCGTT 37015 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||| ||||||| |||| |||||| | ||||||||||||| |||| || Sbjct 37016 TCTCAGGCGTTTTCTCCGGGGTCGAGCCCTAACCCTCCGTTACCCGTTGTCACCACGGCT 37075 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 ||||| | || || ||||||||||||||||||||||||||||||||||||||||||| Sbjct 37076 GGCCAAGACCCAGCCGTCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCG 37135 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 ||||||| ||||||||| ||||||| ||||||||||| |||||||| ||||| |||| Sbjct 37136 CAAGGCCGTGCGATTCGAGAAGTTATCATGAATCACCAGTGAGCCCCGGAGGGCATTGGC 37195 Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360 |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 37196 TTTTAATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTCAGCATGTATTAGCTCTAG 37255 Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 37256 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 37315 Query 421 GCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 480 ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| Sbjct 37316 GCCATTCGCAGTTTCGCTGTATA-ATTGCTTATACTTAGACATGCATGGCTTAATCTTTA 37374 Query 481 AGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||| Sbjct 37375 AGACAAGCATATGACTACTGGCAG 37398 >seq45 Length=5506958 Score = 80.6 bits (88), Expect = 8e-13 Identities = 50/54 (93%), Gaps = 0/54 (0%) Strand=Plus/Minus Query 22 CCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCCCCGTGTCGGGATT 75 |||||||||||||||||||||||||| | ||||||||||| ||||||||| ||| Sbjct 954388 CCCAAAAGAGCCCTGTATCAGTATTTCTCGTCACTACCTCGCCGTGTCGGCATT 954335 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510398791680