Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gaeumannomyces_20sp._20JS-464_20[genbank_20GCA_5F002197995.1_202017-
06-19] 80 sequences; 53,151,282 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq1 356 2e-93
seq12 116 3e-21
>seq1
Length=15654088
Score = 356 bits (394), Expect = 2e-93
Identities = 666/970 (69%), Gaps = 9/970 (1%)
Strand=Plus/Plus
Query 65993 ACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTA 66052
||||||| || || || | || || |||||||| ||||| | ||| || || |||
Sbjct 14220568 ACAAACTGCGGCAGCGCCAACGACGCCAGGTTGCACACAGCCACCTCATCGGGCGCGAG- 14220626
Query 66053 TACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTA 66112
|||||||| || ||||||||||| ||| || ||| |||||||||| |||| || ||
Sbjct 14220627 TACTCGACGATCTCGGTGCACAGGTTAGAGCTGCGGATGGTGCCCAGGTTCTTCTGGTTG 14220686
Query 66113 CTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGAC 66172
|||||||| ||||| || ||||||| |||| | || |||| ||||| |||| |
Sbjct 14220687 CTCTTGCGGTTGCAGTGGTCTTTGTACAGCATGAAGGGGTTGCCAGTCTCGGTCTGGGCC 14220746
Query 66173 TCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTA-CCTTTGCG 66231
|| | |||||| | ||| || | ||||| | ||| | | | ||||| || | ||
Sbjct 14220747 TCGAGGATGGCATACCACAGCTTTTGCGCCTTGAGCGT-CTTGCGGCCCTTGCCCTCACG 14220805
Query 66232 TTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACA 66291
||||| | |||||| | ||||| || || | || | || | || ||
Sbjct 14220806 CTCGTACTTTTCGTACAAAGCCTCGAACTCGTCGCCGTAGCAGTCTGCTAGGCCAGGGCA 14220865
Query 66292 CTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATC 66351
|| || || ||||| |||| ||| || || | || || || || ||| ||||| ||
Sbjct 14220866 CTCGTTGGGGCACATGAGCGTCCAGTCGCCGTTCTTCTCAACCCGCTTCATGAATAGGTC 14220925
Query 66352 AGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTT 66411
|| ||||| ||||| ||| || ||||| || || |||||| ||||||| || ||
Sbjct 14220926 TGGGATCCATAGGGCCAGGAAAAGGTCGCGGGCGCGGATCTCCTCCTTGCCGTGGTTCTT 14220985
Query 66412 GCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGA 66471
||||| |||||||||||| || | |||||| ||||| || ||||| |||||||| || |
Sbjct 14220986 GCGCAGGTCGAGGAACTCGAACACGTCGGCGTGCCACGGCTCCAGATAGATGGCAAAGGC 14221045
Query 66472 GCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAA 66531
||| || ||| |||||| ||||||||||| || || |||||||| ||||| |
Sbjct 14221046 GCCGGGGCGCTTGTTGCCACCCTGGTCGACGTAACGGGCCGTGTTGTTGAAAACACGTAG 14221105
Query 66532 CATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGT-GCCC 66590
||| || |||| ||||| ||| |||| ||||||||| ||||| ||| || ||| || |
Sbjct 14221106 CATGGGCACGATGCCGTTGGATGTGCCGTTGGTGCCGGCGATGTAGGAGCC-CGTGGCGC 14221164
Query 66591 GTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACA--ATC 66648
| || ||| | ||| || || ||||| |||||| |||| ||||| ||||| |
Sbjct 14221165 GGATGCGGTGGATATTGAGGCCGATACCGCCGGCCATCTTGGAGATCATGGCACAGGTTT 14221224
Query 66649 GGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGA 66708
| |||| | | || || || ||| ||| |||| ||| | ||| |||| ||
Sbjct 14221225 TGAGGGTGTC--GTAGATACCATCGATGCTGTCGTCCTTCATGTCGACCAGGAAGCACGA 14221282
Query 66709 ACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTA 66768
|| |||| | ||| ||| |||| |||||| ||||| | ||||| || |||||
Sbjct 14221283 CGACAGCTGGGCCTGGGGCGTGCCGGCGTTGAAGAGAGTGGGAGAGGCGTGGGTGAAGTA 14221342
Query 66769 ATGGCGAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCC 66828
| || |||||| ||||||||||||| || || ||||| ||||| || ||
Sbjct 14221343 CTTGCTCGACATGAGGTTGTACGTCTCGAGCACGCGCTCGATGTTGTCGCCCCAGATGCC 14221402
Query 66829 GAGTGCACATCGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCAT 66888
|| || ||||| | | || || || || ||||| | | | | || | |
Sbjct 14221403 GACAGCGACGCGCATGATCATGTGCTGGGGGCGCTCGACGATCTTGCCGTCGAGCTTGAG 14221462
Query 66889 TAAGTAGGAGCGTTCCAGGGTCTTGATACCAAAGTACGAGTAATTGAAATCGTTAGCATG 66948
| ||| ||||| ||||||||||||| ||||||||| || ||||| || |||
Sbjct 14221463 CAGGTACGAGCGCTCCAGGGTCTTGAAGCCAAAGTACTGATAGTTGAAGTCCCGGTCATA 14221522
Query 66949 CACGATGGCC 66958
|||||||||
Sbjct 14221523 GACGATGGCC 14221532
Score = 118 bits (130), Expect = 8e-22
Identities = 330/496 (67%), Gaps = 18/496 (4%)
Strand=Plus/Plus
Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137
||||| ||||||||||| | | || || || | ||| | || ||||||||||| |||
Sbjct 14219671 TCGACGGTGAACTGGATAGGCTGGGCGGCAGCTTGGGTGCGCAGGTAGTACATGCCCGTC 14219730
Query 65138 TTGAGGCC-AGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAAT-TCGGCT 65195
|||||||| ||| ||| | ||| ||||| || | || | |||| | | ||||
Sbjct 14219731 TTGAGGCCTAGCTT-CCAGCCGGCGAAGTGCATAGACGTTA-TCTTGCCCATGGTGGGCT 14219788
Query 65196 CGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCA 65255
|| || || || || | |||||| || |||||| | || || || || ||||
Sbjct 14219789 CGCGCATGTGGATGTTGAGCGACTGCGATTGGTCGATGAAGGCGCCGCGGTCAGCCGCCA 14219848
Query 65256 TGTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGAC--GTA-CCT 65312
| | | || || ||| ||||||||||| |||||||||||||| ||| |||
Sbjct 14219849 TCTGGACGACGGTGCGCTGCGAGATCTCCCAGACCGTCTTGTACAGGCGCTTGGTATCCT 14219908
Query 65313 CAATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCA 65372
| ||| || | |||| ||||| || || | || || ||||| || ||
Sbjct 14219909 CGG--GGATGCTGG-CGATGTTCTGGATGGAGCCGCCCTCGGCGATGATGCGGTTCTTCA 14219965
Query 65373 TCGACTCTGACCACAAACCCAAATCGATAAGATGTT----GAACCAAGTGACGATTGATG 65428
| || |||||||| || | |||| || | | || ||| | | |||| |
Sbjct 14219966 TGTTGTCGGACCACAAGCCAAGCTCGACCAGGTCCTTCAGGAGCCATGGG----TTGACG 14220021
Query 65429 ACTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAG 65488
|| ||||||||||||| || || ||||| ||||||||||||||| ||| || |||
Sbjct 14220022 ACCTGGAACTCGCCGGCGAGCACGCGACGCTGGTAGATGTTGGACGTGTAGGGCTCGAAG 14220081
Query 65489 GATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAAT 65548
| || ||||||| ||||| || | || || || |||||||| || || | ||
Sbjct 14220082 CACTCGTTGTTGCCCAGAATCTGCGACGTGCTGGCGGTGGGCATGGGCGCCACAAGCAGC 14220141
Query 65549 GAGTTTCGCAATCCGT 65564
||||| |||| ||||
Sbjct 14220142 GAGTTGCGCACACCGT 14220157
>seq12
Length=9596913
Score = 116 bits (128), Expect = 3e-21
Identities = 206/297 (69%), Gaps = 14/297 (5%)
Strand=Plus/Minus
Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146
|| |||| |||||||| ||||| || || || |||||||| | |||||| |||| |||
Sbjct 6219157 ATCTGGCAGATGTACAAGAAGGCTGAGGCCTCGTTCTGGACAGCTGAGGAGATCGACTTG 6219098
Query 61147 TCCAAAGACATGAATGACTGGGAGC----GTTTATCGAGCGGTGAACAACATTTCATTAA 61202
||||| ||| | | |||||| | | ||| ||| || ||| | | |||||
Sbjct 6219097 TCCAAGGACCTCCACGACTGGAACAACAAGCTTAACGA-CGATGAGAAGTACTTCATCTC 6219039
Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262
|| | | || ||||||||| | || |||||||| ||||| | |||| ||
Sbjct 6219038 GCACATCCTCGCCTTCTTTGCC-------ATGGCATCGTCAACGAGAACCTGGTGGAGCG 6218986
Query 61263 TTTCGCGCAG-GAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCA 61321
||| || | ||||| || || | ||||| ||||| ||||| || || ||||| |
Sbjct 6218985 CTTCA-GCGGCGAGGTCCAGGTCCCTGAGGCACGTTGCTTCTATGGGTTTCAGATCATGA 6218927
Query 61322 TGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGC 61378
||||||| |||||||||||| ||| | || ||||| || ||||||| |||||
Sbjct 6218926 TGGAGAACATCCACTCGGAGACTTACTCGCTCCTGATCGACACCTACATCAAGGAGC 6218870
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397567612371200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |