Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gaeumannomyces_20sp._20JS-464_20[genbank_20GCA_5F002197995.1_202017- 06-19] 80 sequences; 53,151,282 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq1 125 3e-23 seq12 89.7 2e-12 >seq1 Length=15654088 Score = 125 bits (138), Expect = 3e-23 Identities = 352/527 (67%), Gaps = 25/527 (5%) Strand=Plus/Minus Query 448639 GGCGCCGTAGGACTTGAAGGAGACGCGCTCCATGTCGCCCAATCGGAGCCCGCCGTGTCG 448698 ||||||||||| | | | || |||||||||| ||||||| || || || |||| | Sbjct 14102059 GGCGCCGTAGGCGATCAGGCAGTCGCGCTCCATCTCGCCCAGGCGCAGGCCTCCGTCCCT 14102000 Query 448699 CAACTTGCCCTCGGTGGGCTGCCGCGTGAGGA--GCGAGTACGGTCCCCTCTGC-CGCGT 448755 || ||||||||||||||| ||||| |||| ||| | || |||| || |||| Sbjct 14101999 GGACCGGCCCTCGGTGGGCTGGCGCGTCAGGATGGCGCG---GGGGCCCTTGGCGCGCGA 14101943 Query 448756 GTGCATCTTCTCCGAGGCCAGTTGCTTGAGGCTCTGGAAGAAGAAGGGCGCGTAGAACAT 448815 ||||||||| ||| | ||| |||||||||| |||| || ||| ||| ||| ||| || Sbjct 14101942 GTGCATCTTGTCCTGGACCATATGCTTGAGGCGCTGGTAGTAGATGGGGCCGTTGAAGAT 14101883 Query 448816 GCGGCACGGCATCATCTCGCCCGTCTGGCCGTCCGTAAAGATCGTC-TTGCCCTCGGGCT 448874 | | | | | ||||||||| ||| || ||| | ||| |||||||| | Sbjct 14101882 GTAGGCCTCGAGCGGCTCGCCCGTGATGCCCGAGGTGAAG-TAGTCCTTGCCCTC---CC 14101827 Query 448875 CGATCATGCCCCTCTCCTCCATG---TAGTCCATGAGCTCGGCCACGGAGAGG-TCCGAA 448930 | | | ||| | ||| | | | |||| |||| |||| | || | || | Sbjct 14101826 AGCTGAAGCCGTGCCGGACCAGGGCCTCGCCCATCTCCTCG---ACGGGGTGGGTGCGGA 14101770 Query 448931 AAG----GCCGT-GCCGTCCTGCGGCAAGCCGCTCTCACAGCCCGTGATGGCCTGGAGGG 448985 | | ||||| ||| | || | ||| ||| | | | | ||| | || Sbjct 14101769 AGGCGTCGCCGTAGCCATAGCGCTTCTCGCC-CTCGACGACGCTGGCTTTGCCCGTCAGG 14101711 Query 448986 C-CTCGAGCAACATGGCGTAGGTCATGCGCGACGGGTAGGCATGCGGGTTCATGATGATG 449044 | ||||| || | || || ||||| || || ||| | | |||||||||||||||||| Sbjct 14101710 CACTCGAACAGCTTGCCGACCGTCATTCGGGAGGGGAAACCGTGCGGGTTCATGATGATG 14101651 Query 449045 TCGGGCGTCTCGCCGGCCGCGTTGAAGGGCATGTCCTCGGGGTTGACCACCAGGCCGTTG 449104 || ||| | ||| | | | ||| ||||||||||| ||| ||| | | |||| | Sbjct 14101650 TCAGGCACCAGGCCCGAGTCCTGGAACGGCATGTCCTCCTGGTCGACGATGATGCCGACG 14101591 Query 449105 ACGCCCTTCTGGCCGTGGCGGCTGCAGAACTTGTCCCCCTGCTCGGG 449151 |||||||| ||||||||||| |||||||||| ||| ||||||| Sbjct 14101590 ACGCCCTTTTGGCCGTGGCGCGACGAGAACTTGTCGCCCAGCTCGGG 14101544 >seq12 Length=9596913 Score = 89.7 bits (98), Expect = 2e-12 Identities = 105/142 (74%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 349074 CGTCGAGAATCTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGG 349133 ||| |||||| |||||||| | |||| || || || |||||||||| || || || | Sbjct 4045740 CGTTGAGAATTTCCTTGAGACGCGGCACACCAAGCGTGACGTTCTTGGACGAGATACCCG 4045681 Query 349134 CAAAGTGGAAGGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGA 349193 || ||||| || | ||| |||| |||||| ||||||||||||| |||| | || | Sbjct 4045680 TGAAATGGAACGTGTTGAGCGTCATCTGCGTCGCGGGCTCGCCGATGGACTGCGCGGCCA 4045621 Query 349194 GGATGCCTACCATCTCGCCGGG 349215 | | || |||||||| || || Sbjct 4045620 GCACACCAACCATCTCACCAGG 4045599 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084737011023840