Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gaeumannomyces_20sp._20JS-464_20[genbank_20GCA_5F002197995.1_202017-
06-19] 80 sequences; 53,151,282 total letters
Query= NC_027867.1
Length=651523
Score E
Sequences producing significant alignments: (Bits) Value
seq1 125 3e-23
seq12 89.7 2e-12
>seq1
Length=15654088
Score = 125 bits (138), Expect = 3e-23
Identities = 352/527 (67%), Gaps = 25/527 (5%)
Strand=Plus/Minus
Query 448639 GGCGCCGTAGGACTTGAAGGAGACGCGCTCCATGTCGCCCAATCGGAGCCCGCCGTGTCG 448698
||||||||||| | | | || |||||||||| ||||||| || || || |||| |
Sbjct 14102059 GGCGCCGTAGGCGATCAGGCAGTCGCGCTCCATCTCGCCCAGGCGCAGGCCTCCGTCCCT 14102000
Query 448699 CAACTTGCCCTCGGTGGGCTGCCGCGTGAGGA--GCGAGTACGGTCCCCTCTGC-CGCGT 448755
|| ||||||||||||||| ||||| |||| ||| | || |||| || ||||
Sbjct 14101999 GGACCGGCCCTCGGTGGGCTGGCGCGTCAGGATGGCGCG---GGGGCCCTTGGCGCGCGA 14101943
Query 448756 GTGCATCTTCTCCGAGGCCAGTTGCTTGAGGCTCTGGAAGAAGAAGGGCGCGTAGAACAT 448815
||||||||| ||| | ||| |||||||||| |||| || ||| ||| ||| ||| ||
Sbjct 14101942 GTGCATCTTGTCCTGGACCATATGCTTGAGGCGCTGGTAGTAGATGGGGCCGTTGAAGAT 14101883
Query 448816 GCGGCACGGCATCATCTCGCCCGTCTGGCCGTCCGTAAAGATCGTC-TTGCCCTCGGGCT 448874
| | | | | ||||||||| ||| || ||| | ||| |||||||| |
Sbjct 14101882 GTAGGCCTCGAGCGGCTCGCCCGTGATGCCCGAGGTGAAG-TAGTCCTTGCCCTC---CC 14101827
Query 448875 CGATCATGCCCCTCTCCTCCATG---TAGTCCATGAGCTCGGCCACGGAGAGG-TCCGAA 448930
| | | ||| | ||| | | | |||| |||| |||| | || | || |
Sbjct 14101826 AGCTGAAGCCGTGCCGGACCAGGGCCTCGCCCATCTCCTCG---ACGGGGTGGGTGCGGA 14101770
Query 448931 AAG----GCCGT-GCCGTCCTGCGGCAAGCCGCTCTCACAGCCCGTGATGGCCTGGAGGG 448985
| | ||||| ||| | || | ||| ||| | | | | ||| | ||
Sbjct 14101769 AGGCGTCGCCGTAGCCATAGCGCTTCTCGCC-CTCGACGACGCTGGCTTTGCCCGTCAGG 14101711
Query 448986 C-CTCGAGCAACATGGCGTAGGTCATGCGCGACGGGTAGGCATGCGGGTTCATGATGATG 449044
| ||||| || | || || ||||| || || ||| | | ||||||||||||||||||
Sbjct 14101710 CACTCGAACAGCTTGCCGACCGTCATTCGGGAGGGGAAACCGTGCGGGTTCATGATGATG 14101651
Query 449045 TCGGGCGTCTCGCCGGCCGCGTTGAAGGGCATGTCCTCGGGGTTGACCACCAGGCCGTTG 449104
|| ||| | ||| | | | ||| ||||||||||| ||| ||| | | |||| |
Sbjct 14101650 TCAGGCACCAGGCCCGAGTCCTGGAACGGCATGTCCTCCTGGTCGACGATGATGCCGACG 14101591
Query 449105 ACGCCCTTCTGGCCGTGGCGGCTGCAGAACTTGTCCCCCTGCTCGGG 449151
|||||||| ||||||||||| |||||||||| ||| |||||||
Sbjct 14101590 ACGCCCTTTTGGCCGTGGCGCGACGAGAACTTGTCGCCCAGCTCGGG 14101544
>seq12
Length=9596913
Score = 89.7 bits (98), Expect = 2e-12
Identities = 105/142 (74%), Gaps = 0/142 (0%)
Strand=Plus/Minus
Query 349074 CGTCGAGAATCTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGG 349133
||| |||||| |||||||| | |||| || || || |||||||||| || || || |
Sbjct 4045740 CGTTGAGAATTTCCTTGAGACGCGGCACACCAAGCGTGACGTTCTTGGACGAGATACCCG 4045681
Query 349134 CAAAGTGGAAGGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGA 349193
|| ||||| || | ||| |||| |||||| ||||||||||||| |||| | || |
Sbjct 4045680 TGAAATGGAACGTGTTGAGCGTCATCTGCGTCGCGGGCTCGCCGATGGACTGCGCGGCCA 4045621
Query 349194 GGATGCCTACCATCTCGCCGGG 349215
| | || |||||||| || ||
Sbjct 4045620 GCACACCAACCATCTCACCAGG 4045599
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2084737011023840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |