Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geosmithia_20flava_20[genbank_20GCA_5F900188565.1_202017-06-24] 1,819 sequences; 29,823,260 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq1602 681 0.0 >seq1602 Length=10865 Score = 681 bits (754), Expect = 0.0 Identities = 563/674 (84%), Gaps = 16/674 (2%) Strand=Plus/Minus Query 14 GCCTAGCCG-TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATG 72 |||||||| |||||||||||||||||||||||||| |||||||||||| |||||||||| Sbjct 4276 GCCTAGCCTCTGTGAAGCTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATG 4217 Query 73 GGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGT 132 ||||||| | ||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 4216 GGAGGTATACGTCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGT 4157 Query 133 GATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAG 192 |||||||||||||||||||||||| |||||| |||||| || ||||||||||| |||||| Sbjct 4156 GATCGAAAGATGAAAAGCACTTTGAAAAGAGGGTTAAATAGTACGTGAAATTGCTGAAAG 4097 Query 193 GGAAGCGCTTGCAACCAGACTTGCCCGCAGTTGCTCAACCGGC-CCCTCGGCCGGTGCAC 251 |||||||||| |||||||||| | || ||| ||||| ||| |||||||||| Sbjct 4096 GGAAGCGCTTATGACCAGACTTGGGCTTGGTGAATCATCCGGCGTTCTC-GCCGGTGCAC 4038 Query 252 TCTTCTGCGGT-CAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGG 310 | | | |||| |||||||||||||| ||| | | |||||||||| |||||| || | Sbjct 4037 TTTGC--CGGTCCAGGCCAGCATCAGTTCGTCCCGGGGGATAAAGGCTTCGGGAACGTAG 3980 Query 311 CCCCCTTCGGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGC 370 | ||| ||| ||||||||| ||| | | ||| | | | ||||||||||| ||| Sbjct 3979 --CTCTTTCGGGAGTGTTATAGACCGTTGCGTAATAC-CCTGGGGTGGACTGAGGTACGC 3923 Query 371 GCTCCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAG 430 | | | || ||||||||||||||||||| | || | ||||||||| ||||||||||||| Sbjct 3922 G-TTCTGCAAGGATGCTGGCGTAATGGTCATCAGTGACCCGTCTTGAAACACGGACCAAG 3864 Query 431 GAGTCTAACATC-TATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAAC 489 ||||| | || |||||||||||| ||||||||||||| | |||||||||||||||||| Sbjct 3863 GAGTC-GTCTTCGTATGCGAGTGTTCGGGTGTCAAACCCCTACGCGTAATGAAAGTGAAC 3805 Query 490 GGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTG 549 | ||| | || | || ||| | |||||||||||||||| ||||||||||||| Sbjct 3804 GTAGGAGAGA----GCTTCGGCGCATCTCCGACCGATCCTGATGTTCTCGGATGGATTTG 3749 Query 550 AGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGC 609 |||||||||||| | |||||||||||| ||||||||||||||| |||||||||||| Sbjct 3748 AGTAAGAGCATACGGGGCCGGACCCGAAAGAAGGTGAACTATGCCTGTATAGGGTGAAGC 3689 Query 610 CAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTT 669 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | Sbjct 3688 CAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATAT 3629 Query 670 GGGTATAGGGGCGA 683 ||| || ||||||| Sbjct 3628 GGGCATGGGGGCGA 3615 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079960982450