Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geosmithia_20flava_20[genbank_20GCA_5F900188565.1_202017-06-24] 1,819 sequences; 29,823,260 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq476 140 8e-31 >seq476 Length=19763 Score = 140 bits (154), Expect = 8e-31 Identities = 199/277 (72%), Gaps = 11/277 (4%) Strand=Plus/Plus Query 11 CTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCG 70 ||| |||| |||||| ||| ||||||||| ||||| | |||||||| |||| Sbjct 5438 CTGTATCTGCACAGCTATTCCAATTTCACCGAGTCAATCATAGAGACAGCTGTTGTATCG 5497 Query 71 TTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 130 |||| |||||| |||| | | | | ||| | | ||||| ||||||||||||||||||| | Sbjct 5498 TTACACCATTCATGCAAGACCGCATTTAACGGCCAAGGCATTTCGCTACCTTAGGACCCT 5557 Query 131 TATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAACCCCA 190 | |||| ||||||| || ||||||| ||| |||| | | ||||| | | | | Sbjct 5558 CA-CGTTAAGGCCGCCTTTAACCGGGGGTTCTGTCAACATC-AAATGTTAGATCATTCAA 5615 Query 191 TCA-----ATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTG 245 | | ||||||| |||||||||||||| |||||| ||||| | | ||| | Sbjct 5616 TTATCTTCATTAACCAGCCGGCACCGGGCAGATTTCACACTTTATACTTAGATTTTTTTA 5675 Query 246 TTT----GCAGAGTGCTGTGTTTTTAATAAACAGTCG 278 | | ||| ||||||||||||| | |||||||||| Sbjct 5676 TCTTTCAGCAAAGTGCTGTGTTTTAATTAAACAGTCG 5712 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260777066048