Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geosmithia_20flava_20[genbank_20GCA_5F900188565.1_202017-06-24] 1,819 sequences; 29,823,260 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq476 96.9 1e-17 >seq476 Length=19763 Score = 96.9 bits (106), Expect = 1e-17 Identities = 137/193 (71%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 295 GGGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGA 354 |||||| | | ||| |||||||| | | || |||||||| |||||| ||| Sbjct 10053 GGGGACTAAGACAAGTCATCATGGTCTTGATACCGCGGGCTACAGACGTGCCACATATTC 9994 Query 355 CAATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTC 414 | | |||||| | || ||| | || | |||| |||| || ||| | | || | Sbjct 9993 CTAGACAAAGAGATGCAAAAATGTGAATTTAAGCTAATCTCAAAAAATAGGATACAATAT 9934 Query 415 GGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCA 474 ||||||||||||| |||||||||| ||||| | ||| |||||||||||| |||| || Sbjct 9933 GGATTGTAGTCTGAAACTCGACTACATGAAAAAGTAATTGCTAGTAATCGTGAATCACCA 9874 Query 475 TGCTACGGTGAAT 487 || ||||||||| Sbjct 9873 TGTCACGGTGAAT 9861 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503972642240