Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Geosmithia_20flava_20[genbank_20GCA_5F900188565.1_202017-06-24]
1,819 sequences; 29,823,260 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq1602 349 6e-94
>seq1602
Length=10865
Score = 349 bits (386), Expect = 6e-94
Identities = 235/259 (91%), Gaps = 3/259 (1%)
Strand=Plus/Plus
Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60
|||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5326 TACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 5385
Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120
||||||||||||||||||||||||| |||| || ||| ||||||||||||||||| ||||
Sbjct 5386 ACCTGTTATTGCCTCAAACTTCCATCGGCTTGA-GCCGATAGTCCCTCTAAGAAGTCAGC 5444
Query 121 CACCAACCATAGTCGATGGGG-CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179
| ||| || | || || |||||||| |||||||||||||||||||||||| ||||
Sbjct 5445 GTACTGCCAAAG-CAATACGGACTATTTAGTAGGTTAAGGTCTCGTTCGTTATCGCAATT 5503
Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239
|| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct 5504 AAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAG 5563
Query 240 AAAGAGCTATCAATCTGTC 258
|||||||| ||||||||||
Sbjct 5564 AAAGAGCTCTCAATCTGTC 5582
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796785959139
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |