Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Graphilbum_20fragrans_20[genbank_20GCA_5F001513895.1_202016-01-13]
80 sequences; 34,270,891 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq60 228 1e-57
>seq60
Length=8672
Score = 228 bits (252), Expect = 1e-57
Identities = 177/206 (86%), Gaps = 5/206 (2%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||||||| || ||||||||| |||||||||||| ||| |
Sbjct 5347 GTACAAAGGGCAGGGACGTAATCAACGCAAG-TTGATGACTTGCGCTTACTAGGGATT-C 5290
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119
||||||||||| ||| |||||||||| |||||||||| ||||| | ||||| ||||||
Sbjct 5289 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGAGTTTCACAAGATT 5230
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
|||||| ||| |||||||||| || |||| || | |||||||| ||||||||||
Sbjct 5229 ACCCGGGCCTTTCGGCCAAGGAAGTA--CTCGCTGGCTCTGTCAGTGTAACGCGCGTGCG 5172
Query 180 GCCCAGAACATCTAAGGGCATCACAG 205
||||||||||||||||||||||||||
Sbjct 5171 GCCCAGAACATCTAAGGGCATCACAG 5146
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751999417200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |