Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Graphilbum_20fragrans_20[genbank_20GCA_5F001513895.1_202016-01-13] 80 sequences; 34,270,891 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq60 228 1e-57 >seq60 Length=8672 Score = 228 bits (252), Expect = 1e-57 Identities = 177/206 (86%), Gaps = 5/206 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| || ||||||||| |||||||||||| ||| | Sbjct 5347 GTACAAAGGGCAGGGACGTAATCAACGCAAG-TTGATGACTTGCGCTTACTAGGGATT-C 5290 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| | ||||| |||||| Sbjct 5289 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGAGTTTCACAAGATT 5230 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||||| ||| |||||||||| || |||| || | |||||||| |||||||||| Sbjct 5229 ACCCGGGCCTTTCGGCCAAGGAAGTA--CTCGCTGGCTCTGTCAGTGTAACGCGCGTGCG 5172 Query 180 GCCCAGAACATCTAAGGGCATCACAG 205 |||||||||||||||||||||||||| Sbjct 5171 GCCCAGAACATCTAAGGGCATCACAG 5146 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751999417200