Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Graphilbum_20fragrans_20[genbank_20GCA_5F001513895.1_202016-01-13]
80 sequences; 34,270,891 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq60 695 0.0
>seq60
Length=8672
Score = 695 bits (770), Expect = 0.0
Identities = 558/665 (84%), Gaps = 15/665 (2%)
Strand=Plus/Plus
Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82
||| |||||||||||||||||||||| |||||||||||| |||| |||||||||||||||
Sbjct 6285 TGTAAAGCTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCAAAATGGGAGGTAAAT 6344
Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 6345 TTCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 6404
Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202
|||||||||||||| |||||| |||||| || |||||||||||||||||||||||||| |
Sbjct 6405 TGAAAAGCACTTTGAAAAGAGGGTTAAACAGTACGTGAAATTGTTGAAAGGGAAGCGCCT 6464
Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAACCGGC-CCCTCGGCCGGTGCACTCTTCTGCGG 261
||||||||||| | | | || ||||| ||| ||||||||| |||| ||||
Sbjct 6465 ATGACCAGACTTGCGCCCCGCGAACCACCCGGCGTTCTC-GCCGGTGCA--CTTC-GCGG 6520
Query 262 ---TCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTC 318
|||||||||||| | | | ||||||||||| |||||| || | | |||
Sbjct 6521 GATGCAGGCCAGCATCGGTTTTCTTAGGGGGATAAAGGCCGCGGGAACGTAG--CTCTTT 6578
Query 319 GGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGC 378
||| ||||||||||||| |||| |||| | | |||| |||| ||||||| ||||
Sbjct 6579 CGGGAGTGTTATAGCCCGTGGTGTCATGC-CCTTGAGGGGACCGAGGACCGCGCTTCGGC 6637
Query 379 TAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAA 438
||||||||||||||||||| | |||| ||||||||| |||||||||||||||||| |
Sbjct 6638 AAGGATGCTGGCGTAATGGTCATCAGCGACCCGTCTTGAAACACGGACCAAGGAGTCAAG 6697
Query 439 CATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGG 498
||| ||||||||||||||| |||||||| |||| ||||||||| |||| ||||| |
Sbjct 6698 CATTAGGGCGAGTGTTTGGGTGACAAACCCGCACGCGAAATGAAAGTAAACGCAGGTGAG 6757
Query 499 AACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGC 558
| | || ||| ||||||||||||||||||| |||||||||||||||||||||||
Sbjct 6758 A----GCTTCGGCGCATCATCGACCGATCCTGATGTATTCGGATGGATTTGAGTAAGAGC 6813
Query 559 ATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAA 618
| | | | |||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 6814 CTTACCGCTTGGACCCGAAAGATGGTGAACTATGCCTGTATAGGGTGAAGCCAGAGGAAA 6873
Query 619 CTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGG 678
||||||||||||||||||||||||||| ||||||||||||||||||||| |||| || ||
Sbjct 6874 CTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATATGGGCATGGG 6933
Query 679 GGCGA 683
|||||
Sbjct 6934 GGCGA 6938
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079998284000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |