Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Graphilbum_20fragrans_20[genbank_20GCA_5F001513895.1_202016-01-13] 80 sequences; 34,270,891 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq60 695 0.0 >seq60 Length=8672 Score = 695 bits (770), Expect = 0.0 Identities = 558/665 (84%), Gaps = 15/665 (2%) Strand=Plus/Plus Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82 ||| |||||||||||||||||||||| |||||||||||| |||| ||||||||||||||| Sbjct 6285 TGTAAAGCTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCAAAATGGGAGGTAAAT 6344 Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142 |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 6345 TTCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 6404 Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202 |||||||||||||| |||||| |||||| || |||||||||||||||||||||||||| | Sbjct 6405 TGAAAAGCACTTTGAAAAGAGGGTTAAACAGTACGTGAAATTGTTGAAAGGGAAGCGCCT 6464 Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAACCGGC-CCCTCGGCCGGTGCACTCTTCTGCGG 261 ||||||||||| | | | || ||||| ||| ||||||||| |||| |||| Sbjct 6465 ATGACCAGACTTGCGCCCCGCGAACCACCCGGCGTTCTC-GCCGGTGCA--CTTC-GCGG 6520 Query 262 ---TCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTC 318 |||||||||||| | | | ||||||||||| |||||| || | | ||| Sbjct 6521 GATGCAGGCCAGCATCGGTTTTCTTAGGGGGATAAAGGCCGCGGGAACGTAG--CTCTTT 6578 Query 319 GGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGC 378 ||| ||||||||||||| |||| |||| | | |||| |||| ||||||| |||| Sbjct 6579 CGGGAGTGTTATAGCCCGTGGTGTCATGC-CCTTGAGGGGACCGAGGACCGCGCTTCGGC 6637 Query 379 TAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAA 438 ||||||||||||||||||| | |||| ||||||||| |||||||||||||||||| | Sbjct 6638 AAGGATGCTGGCGTAATGGTCATCAGCGACCCGTCTTGAAACACGGACCAAGGAGTCAAG 6697 Query 439 CATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGG 498 ||| ||||||||||||||| |||||||| |||| ||||||||| |||| ||||| | Sbjct 6698 CATTAGGGCGAGTGTTTGGGTGACAAACCCGCACGCGAAATGAAAGTAAACGCAGGTGAG 6757 Query 499 AACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGC 558 | | || ||| ||||||||||||||||||| ||||||||||||||||||||||| Sbjct 6758 A----GCTTCGGCGCATCATCGACCGATCCTGATGTATTCGGATGGATTTGAGTAAGAGC 6813 Query 559 ATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAA 618 | | | | |||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 6814 CTTACCGCTTGGACCCGAAAGATGGTGAACTATGCCTGTATAGGGTGAAGCCAGAGGAAA 6873 Query 619 CTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGG 678 ||||||||||||||||||||||||||| ||||||||||||||||||||| |||| || || Sbjct 6874 CTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATATGGGCATGGG 6933 Query 679 GGCGA 683 ||||| Sbjct 6934 GGCGA 6938 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079998284000