Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Graphilbum_20fragrans_20[genbank_20GCA_5F001513895.1_202016-01-13] 80 sequences; 34,270,891 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq80 96.9 9e-18 >seq80 Length=25567 Score = 96.9 bits (106), Expect = 9e-18 Identities = 193/280 (69%), Gaps = 6/280 (2%) Strand=Plus/Minus Query 4 GGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCC 63 || || |||| |||| ||||| | | ||||||||||||||| | |||||||| Sbjct 16946 GGGTAAACTGTATCTGCACAGTTACTCCAATTTCACTGAGTCAATCTTAGAGACAGCTGT 16887 Query 64 GCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTA 123 |||||||| ||||| |||| | | | | ||| | | ||||| |||||||||||||| Sbjct 16886 TGTATCGTTACATCATTCATGCAAGACCGCATTTAACGGCCAAGGCATTTCGCTACCTTA 16827 Query 124 GGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTA--G 181 ||| | | | |||| | ||||| || | ||||| ||| | || | | || | Sbjct 16826 GGATCCTCA-CGTTAAGACCGCCATTGATCGGGGGTTCCTTAAAAACCAAACTTATAATG 16768 Query 182 CTAACCCCA-TCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTT 240 | | | | |||||| ||| || ||||||| | |||||| | |||| | | || Sbjct 16767 TTTAGTAGATTTCGTTAACCAGCCGACATCGGGCAGACATCACACTCAATACTTTGATTT 16708 Query 241 -TCGT-GTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCG 278 || | |||||| |||||| |||||| | |||||||||| Sbjct 16707 ATCATCTTTTGCAAAGTGCTTTGTTTTAATTAAACAGTCG 16668 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260798991360