Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Graphilbum_20fragrans_20[genbank_20GCA_5F001513895.1_202016-01-13]
80 sequences; 34,270,891 total letters
Query= AAMG01000636.1
Length=426
Score E
Sequences producing significant alignments: (Bits) Value
seq80 96.9 9e-18
>seq80
Length=25567
Score = 96.9 bits (106), Expect = 9e-18
Identities = 193/280 (69%), Gaps = 6/280 (2%)
Strand=Plus/Minus
Query 4 GGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCC 63
|| || |||| |||| ||||| | | ||||||||||||||| | ||||||||
Sbjct 16946 GGGTAAACTGTATCTGCACAGTTACTCCAATTTCACTGAGTCAATCTTAGAGACAGCTGT 16887
Query 64 GCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTA 123
|||||||| ||||| |||| | | | | ||| | | ||||| ||||||||||||||
Sbjct 16886 TGTATCGTTACATCATTCATGCAAGACCGCATTTAACGGCCAAGGCATTTCGCTACCTTA 16827
Query 124 GGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTA--G 181
||| | | | |||| | ||||| || | ||||| ||| | || | | || |
Sbjct 16826 GGATCCTCA-CGTTAAGACCGCCATTGATCGGGGGTTCCTTAAAAACCAAACTTATAATG 16768
Query 182 CTAACCCCA-TCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTT 240
| | | | |||||| ||| || ||||||| | |||||| | |||| | | ||
Sbjct 16767 TTTAGTAGATTTCGTTAACCAGCCGACATCGGGCAGACATCACACTCAATACTTTGATTT 16708
Query 241 -TCGT-GTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCG 278
|| | |||||| |||||| |||||| | ||||||||||
Sbjct 16707 ATCATCTTTTGCAAAGTGCTTTGTTTTAATTAAACAGTCG 16668
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1260798991360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |