Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Graphilbum_20fragrans_20[genbank_20GCA_5F001513895.1_202016-01-13] 80 sequences; 34,270,891 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq80 87.8 5e-15 >seq80 Length=25567 Score = 87.8 bits (96), Expect = 5e-15 Identities = 133/186 (72%), Gaps = 5/186 (3%) Strand=Plus/Plus Query 306 CAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATACAAAGG 365 ||| |||||||| || ||||| | ||||||| | |||||| ||| | | |||||| Sbjct 12142 CAAGTCATCATGGCCTTTATGTTGTGGGCTATAGACGTGCCACATATACCTAGACAAAGA 12201 Query 366 GCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTG--TTCTCAG--TTCGGATTGT 421 | || ||| | || | |||| |||| ||||| | | | || | ||||||| Sbjct 12202 GATGCTAAATTGAGAAATTAAGCTAATCT-ATAAAATAGGGTAAAAAGGATAAGGATTGT 12260 Query 422 AGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCATGCTACG 481 |||||| |||||||||||||||| | ||| ||||||||||| |||| || | ||| Sbjct 12261 AGTCTGAAACTCGACTATATGAATAAGTAATTACTAGTAATCGTGAATCACCACGTCACG 12320 Query 482 GTGAAT 487 |||||| Sbjct 12321 GTGAAT 12326 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503998796800