Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Graphilbum_20fragrans_20[genbank_20GCA_5F001513895.1_202016-01-13] 80 sequences; 34,270,891 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq60 279 8e-73 >seq60 Length=8672 Score = 279 bits (308), Expect = 8e-73 Identities = 236/280 (84%), Gaps = 9/280 (3%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| || |||||| |||||||||||||||| |||| |||| |||||| Sbjct 753 GTACGAGAGGAACCGCTGA-TTCAGA-TAATTGGTTTTTGCGGTTGTCCGACCGGGCAGT 810 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 811 GCCGCGACGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 870 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180 ||||| || ||| | |||| |||| | |||| ||||| ||||||||||||||| || | Sbjct 871 GAACGCGGCGATAC-CTCCCGCACGTTGTAGACGGATCAGAATAGGCTTCGGCCTCGTAT 929 Query 181 CTTAGCAGGCCGGCAACGGGCGTCCCGC-GGAAGCGCGGGGCGCTCAGCTGGCGGATTGC 239 |||||||||| | | | |||| || ||||| || |||| || | ||| ||||| Sbjct 930 CTTAGCAGGC--GGTTCCGCCGTCGAGCTGGAAGTGCTCGGCGGTCTTC-CGCGTATTGC 986 Query 240 AATTTCACCATGCGCAGGGAT-AAATCCTTTGCAGACGAC 278 ||||||| || |||| ||||| |||||||||||||||||| Sbjct 987 AATTTCAACACGCGC-GGGATCAAATCCTTTGCAGACGAC 1025 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819199365120