Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Graphilbum_20fragrans_20[genbank_20GCA_5F001513895.1_202016-01-13]
80 sequences; 34,270,891 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq60 279 8e-73
>seq60
Length=8672
Score = 279 bits (308), Expect = 8e-73
Identities = 236/280 (84%), Gaps = 9/280 (3%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| || |||||| |||||||||||||||| |||| |||| ||||||
Sbjct 753 GTACGAGAGGAACCGCTGA-TTCAGA-TAATTGGTTTTTGCGGTTGTCCGACCGGGCAGT 810
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 811 GCCGCGACGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 870
Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180
||||| || ||| | |||| |||| | |||| ||||| ||||||||||||||| || |
Sbjct 871 GAACGCGGCGATAC-CTCCCGCACGTTGTAGACGGATCAGAATAGGCTTCGGCCTCGTAT 929
Query 181 CTTAGCAGGCCGGCAACGGGCGTCCCGC-GGAAGCGCGGGGCGCTCAGCTGGCGGATTGC 239
|||||||||| | | | |||| || ||||| || |||| || | ||| |||||
Sbjct 930 CTTAGCAGGC--GGTTCCGCCGTCGAGCTGGAAGTGCTCGGCGGTCTTC-CGCGTATTGC 986
Query 240 AATTTCACCATGCGCAGGGAT-AAATCCTTTGCAGACGAC 278
||||||| || |||| ||||| ||||||||||||||||||
Sbjct 987 AATTTCAACACGCGC-GGGATCAAATCCTTTGCAGACGAC 1025
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819199365120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |