Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Herpotrichiellaceae_20sp._20UM238_20[genbank_20GCA_5F000315175.1_202 012-11-26] 217 sequences; 28,364,325 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq188 468 9e-130 >seq188 Length=8484 Score = 468 bits (518), Expect = 9e-130 Identities = 290/309 (94%), Gaps = 1/309 (0%) Strand=Plus/Plus Query 10 CGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGAGCCAG 69 ||| |||||||||||||||||||| || ||||||||||||||| || ||||| |||| Sbjct 3127 CGGTCGGGCCTTTCCTTCTGGGGAGCCCGATGCCCTTCACTGGGCGTCGTGGGGAACCAG 3186 Query 70 GACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCA 129 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3187 GACTTTTACCTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCA 3246 Query 130 TGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGA 189 ||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||||| Sbjct 3247 TGGAATAATAGAATAGGACA-GAGGTTCTATTTTGTTGGTTTCTAGGACCGCTGTAATGA 3305 Query 190 TTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTA 249 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct 3306 TTAATAGGGATAGTCGGGGGCGTCCGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTA 3365 Query 250 TTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAA 309 |||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||||||| Sbjct 3366 TTGAAGACGAACTACTGCGAAAGCATTCGCCAAGGATGTTTTCATTAATCAGTGAACGAA 3425 Query 310 AGTTAGGGG 318 ||||||||| Sbjct 3426 AGTTAGGGG 3434 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915198014016