Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Herpotrichiellaceae_20sp._20UM238_20[genbank_20GCA_5F000315175.1_202
012-11-26] 217 sequences; 28,364,325 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq188 791 0.0
>seq188
Length=8484
Score = 791 bits (876), Expect = 0.0
Identities = 580/669 (87%), Gaps = 9/669 (1%)
Strand=Plus/Plus
Query 21 CGTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAA 80
||||| || ||||||||||||||||| | |||||||||||| | || ||||||| |||||
Sbjct 5028 CGTGTAAAACTCCTTCGACGAGTCGACTAGTTTGGGAATGCTGGTCAAAATGGGTGGTAA 5087
Query 81 ATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAA 140
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5088 ATTTCATCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAA 5147
Query 141 GATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGC 200
|||||||||||||||| ||||||||||||| || | ||||||||||||||||||||||||
Sbjct 5148 GATGAAAAGCACTTTGAAAAGAGAGTTAAACAGTATGTGAAATTGTTGAAAGGGAAGCGC 5207
Query 201 TTGCAACCAGACT--TGCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTG 258
||||||||||| ||| || ||| | | | || || ||| |||| | |
Sbjct 5208 AGGCAACCAGACTCGTGCGCGGGGTTCCCC--CTTGCTTCTGCTTGGGT-CACTTCCCCG 5264
Query 259 CGGTCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCC--CT 316
| | ||||| |||||| | || || ||| |||||| | |||||||| || | ||
Sbjct 5265 TGTCCGGGCCATCATCAGTTTCGGGGGCCGGTCAAAGGCTCTGGGAATGTATCCTCGCCT 5324
Query 317 TCGGGGGGTG--TTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTC 374
||||||| | ||||||||| ||||| |||||||| || ||||||||| ||||||
Sbjct 5325 TCGGGGGAGGACTTATAGCCCAGGGTGTCATGCGGCCACCCGGGACTGAGGAACGCGCTT 5384
Query 375 CGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGT 434
|||| |||||| ||||||||||||||| ||| ||||||||| |||||||||||||||||
Sbjct 5385 CGGCGAGGATGATGGCGTAATGGTTGTCTGCGACCCGTCTTGAAACACGGACCAAGGAGT 5444
Query 435 CTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGG 494
|||||||||||||||||||| ||||||||||||| |||||| ||||||||||||||||||
Sbjct 5445 CTAACATCTATGCGAGTGTTCGGGTGTCAAACCCTTGCGCGGAATGAAAGTGAACGGAGG 5504
Query 495 TGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAA 554
| |||| | |||| ||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 5505 TAGGAAGGCCTGAGCCTGCACTATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAA 5564
Query 555 GAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAG 614
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 5565 GAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCGTGAATAGGGTGAAGCCAGAG 5624
Query 615 GAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTA 674
||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||
Sbjct 5625 GAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGCGTA 5684
Query 675 TAGGGGCGA 683
|||||||||
Sbjct 5685 TAGGGGCGA 5693
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079995345350
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |