Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Herpotrichiellaceae_20sp._20UM238_20[genbank_20GCA_5F000315175.1_202 012-11-26] 217 sequences; 28,364,325 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq188 791 0.0 >seq188 Length=8484 Score = 791 bits (876), Expect = 0.0 Identities = 580/669 (87%), Gaps = 9/669 (1%) Strand=Plus/Plus Query 21 CGTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAA 80 ||||| || ||||||||||||||||| | |||||||||||| | || ||||||| ||||| Sbjct 5028 CGTGTAAAACTCCTTCGACGAGTCGACTAGTTTGGGAATGCTGGTCAAAATGGGTGGTAA 5087 Query 81 ATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAA 140 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5088 ATTTCATCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAA 5147 Query 141 GATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGC 200 |||||||||||||||| ||||||||||||| || | |||||||||||||||||||||||| Sbjct 5148 GATGAAAAGCACTTTGAAAAGAGAGTTAAACAGTATGTGAAATTGTTGAAAGGGAAGCGC 5207 Query 201 TTGCAACCAGACT--TGCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTG 258 ||||||||||| ||| || ||| | | | || || ||| |||| | | Sbjct 5208 AGGCAACCAGACTCGTGCGCGGGGTTCCCC--CTTGCTTCTGCTTGGGT-CACTTCCCCG 5264 Query 259 CGGTCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCC--CT 316 | | ||||| |||||| | || || ||| |||||| | |||||||| || | || Sbjct 5265 TGTCCGGGCCATCATCAGTTTCGGGGGCCGGTCAAAGGCTCTGGGAATGTATCCTCGCCT 5324 Query 317 TCGGGGGGTG--TTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTC 374 ||||||| | ||||||||| ||||| |||||||| || ||||||||| |||||| Sbjct 5325 TCGGGGGAGGACTTATAGCCCAGGGTGTCATGCGGCCACCCGGGACTGAGGAACGCGCTT 5384 Query 375 CGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGT 434 |||| |||||| ||||||||||||||| ||| ||||||||| ||||||||||||||||| Sbjct 5385 CGGCGAGGATGATGGCGTAATGGTTGTCTGCGACCCGTCTTGAAACACGGACCAAGGAGT 5444 Query 435 CTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGG 494 |||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||||| Sbjct 5445 CTAACATCTATGCGAGTGTTCGGGTGTCAAACCCTTGCGCGGAATGAAAGTGAACGGAGG 5504 Query 495 TGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAA 554 | |||| | |||| ||||| |||||||||||||||||||||||||||||||||||||| Sbjct 5505 TAGGAAGGCCTGAGCCTGCACTATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAA 5564 Query 555 GAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAG 614 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 5565 GAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCGTGAATAGGGTGAAGCCAGAG 5624 Query 615 GAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTA 674 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| Sbjct 5625 GAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGCGTA 5684 Query 675 TAGGGGCGA 683 ||||||||| Sbjct 5685 TAGGGGCGA 5693 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079995345350