Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Herpotrichiellaceae_20sp._20UM238_20[genbank_20GCA_5F000315175.1_202
012-11-26] 217 sequences; 28,364,325 total letters
Query= AAMG01000636.1
Length=426
Score E
Sequences producing significant alignments: (Bits) Value
seq187 138 3e-30
>seq187
Length=32578
Score = 138 bits (152), Expect = 3e-30
Identities = 197/274 (72%), Gaps = 4/274 (1%)
Strand=Plus/Plus
Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66
|| || | |||| ||| || ||| ||||||||||||| | | ||||||||
Sbjct 20473 TAAACAGTATCTGCACTGCTATTCCAATTTCACTGAGCCAATCATCGAGACAGCTGTTGT 20532
Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126
|||||||| ||||| |||| | | | | ||| | | || || ||| |||||||||||||
Sbjct 20533 ATCGTTACATCATTCATGCAAGACCGCATTTAACGGCCAGGGTATTCCGCTACCTTAGGA 20592
Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCT-TCGCGTTAG-CTA 184
|| | || | || |||||||||||| ||||| ||| ||| ||| || |||| ||
Sbjct 20593 CCCTCATCGGTAAGGCCGCCGTTTATCGGGGTTTCCATCCAGACCTAATTTTTTAGTTTA 20652
Query 185 ACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGT 244
| || || | ||| || ||| ||| |||||| | |||||| | ||| || | || |
Sbjct 20653 AGCCTATTAGTTACCCGGCCGACACAGGGCAGACATCACACTCAATAGTTCGA--TTTAT 20710
Query 245 GTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCG 278
|| |||||||||| |||||| | ||||||||||
Sbjct 20711 CTTGGCAGAGTGCTTTGTTTTAATTAAACAGTCG 20744
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1260797264064
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |