Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Herpotrichiellaceae_20sp._20UM238_20[genbank_20GCA_5F000315175.1_202 012-11-26] 217 sequences; 28,364,325 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq187 138 3e-30 >seq187 Length=32578 Score = 138 bits (152), Expect = 3e-30 Identities = 197/274 (72%), Gaps = 4/274 (1%) Strand=Plus/Plus Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66 || || | |||| ||| || ||| ||||||||||||| | | |||||||| Sbjct 20473 TAAACAGTATCTGCACTGCTATTCCAATTTCACTGAGCCAATCATCGAGACAGCTGTTGT 20532 Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126 |||||||| ||||| |||| | | | | ||| | | || || ||| ||||||||||||| Sbjct 20533 ATCGTTACATCATTCATGCAAGACCGCATTTAACGGCCAGGGTATTCCGCTACCTTAGGA 20592 Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCT-TCGCGTTAG-CTA 184 || | || | || |||||||||||| ||||| ||| ||| ||| || |||| || Sbjct 20593 CCCTCATCGGTAAGGCCGCCGTTTATCGGGGTTTCCATCCAGACCTAATTTTTTAGTTTA 20652 Query 185 ACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGT 244 | || || | ||| || ||| ||| |||||| | |||||| | ||| || | || | Sbjct 20653 AGCCTATTAGTTACCCGGCCGACACAGGGCAGACATCACACTCAATAGTTCGA--TTTAT 20710 Query 245 GTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCG 278 || |||||||||| |||||| | |||||||||| Sbjct 20711 CTTGGCAGAGTGCTTTGTTTTAATTAAACAGTCG 20744 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260797264064