Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Herpotrichiellaceae_20sp._20UM238_20[genbank_20GCA_5F000315175.1_202
012-11-26] 217 sequences; 28,364,325 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq188 367 2e-99
>seq188
Length=8484
Score = 367 bits (406), Expect = 2e-99
Identities = 239/259 (92%), Gaps = 3/259 (1%)
Strand=Plus/Minus
Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60
|||||| |||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3936 TACTCGCTGGCCCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 3877
Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120
||||||| ||||||| ||||||||||||| || ||||| ||||||||||||||||||||
Sbjct 3876 ACCTGTTTTTGCCTCGTACTTCCATTGGCTTGA-GCCAAAAGTCCCTCTAAGAAGCCAGC 3818
Query 121 CACCAACCATAGTCGA-TGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179
|||| | | || ||| |||||||||||||||||| ||||||||||||||||||| ||||
Sbjct 3817 CACCCGCAAAAG-CGAGTGGGGCTATTTAGCAGGTCAAGGTCTCGTTCGTTATCGCAATT 3759
Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239
|| |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||
Sbjct 3758 AAGCAGACAAATCACTCCACCAACTAAAAACGGCCATGCACCACCACCCATACAATCAAG 3699
Query 240 AAAGAGCTATCAATCTGTC 258
|||||||||||||||||||
Sbjct 3698 AAAGAGCTATCAATCTGTC 3680
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796798324977
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |