Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Herpotrichiellaceae_20sp._20UM238_20[genbank_20GCA_5F000315175.1_202 012-11-26] 217 sequences; 28,364,325 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq188 367 2e-99 >seq188 Length=8484 Score = 367 bits (406), Expect = 2e-99 Identities = 239/259 (92%), Gaps = 3/259 (1%) Strand=Plus/Minus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 |||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3936 TACTCGCTGGCCCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 3877 Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120 ||||||| ||||||| ||||||||||||| || ||||| |||||||||||||||||||| Sbjct 3876 ACCTGTTTTTGCCTCGTACTTCCATTGGCTTGA-GCCAAAAGTCCCTCTAAGAAGCCAGC 3818 Query 121 CACCAACCATAGTCGA-TGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179 |||| | | || ||| |||||||||||||||||| ||||||||||||||||||| |||| Sbjct 3817 CACCCGCAAAAG-CGAGTGGGGCTATTTAGCAGGTCAAGGTCTCGTTCGTTATCGCAATT 3759 Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239 || |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct 3758 AAGCAGACAAATCACTCCACCAACTAAAAACGGCCATGCACCACCACCCATACAATCAAG 3699 Query 240 AAAGAGCTATCAATCTGTC 258 ||||||||||||||||||| Sbjct 3698 AAAGAGCTATCAATCTGTC 3680 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796798324977