Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Herpotrichiellaceae_20sp._20UM238_20[genbank_20GCA_5F000315175.1_202 012-11-26] 217 sequences; 28,364,325 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq188 450 3e-124 >seq188 Length=8484 Score = 450 bits (498), Expect = 3e-124 Identities = 285/309 (92%), Gaps = 0/309 (0%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || ||||||||| ||||||||||||||| | |||||| |||||| || |||||||||| Sbjct 3771 GAACGAGACCTTGACCTGCTAAATAGCCCCACTCGCTTTTGCGGGTGGCTGGCTTCTTAG 3830 Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 139 ||||||| | |||||||||| |||||||| ||||||| ||||||||||||||||||||| Sbjct 3831 AGGGACTTTTGGCTCAAGCCAATGGAAGTACGAGGCAAAAACAGGTCTGTGATGCCCTTA 3890 Query 140 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCG 199 |||||||||||||||||||||||||||||||||| |||| ||||| |||||||||||||| Sbjct 3891 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGGGCCAGCGAGTACATCACCTTGGCCG 3950 Query 200 GAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 259 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 3951 AAAGGTCTGGGTAATCTTGTTAAACCCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 4010 Query 260 CTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTG 319 ||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| Sbjct 4011 CTCTTCAACGAGGAATGCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCTG 4070 Query 320 CCCTTTGTA 328 ||||||||| Sbjct 4071 CCCTTTGTA 4079 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947197944576