Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Herpotrichiellaceae_20sp._20UM238_20[genbank_20GCA_5F000315175.1_202
012-11-26] 217 sequences; 28,364,325 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq188 228 1e-57
>seq188
Length=8484
Score = 228 bits (252), Expect = 1e-57
Identities = 230/288 (80%), Gaps = 21/288 (7%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| || |||||| ||||||||||||||||||||||||||||||| |
Sbjct 7780 GTACGAGAGGAACCGTTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGACCAGGCATT 7837
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||| |||||||||||| ||||||||||||||||||||||||||||||||| ||||
Sbjct 7838 GCCGCGACGCTACCATCTGCCGGATTATGGCTGAACGCCTCTAAGTCAGAATCCGTGCCG 7897
Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTC--GGCCCCGA 178
||||||| | ||| || |||| |||||| ||||||||||||||| || |||| ||
Sbjct 7898 GAACGGGACCTTACTC-CCCGCACGTCGTAGACGGATACGAATAGGCCTCCGGGCCACGC 7956
Query 179 ACCTTAGCAGGCCGGCAAC---GGGCGTCCCGCGGAAGCGCGGGGCG----CTCAGCTGG 231
||| | ||||| || | | ||||||| ||||| |||||| |||| | ||
Sbjct 7957 ACCCCAACAGGCTGGTACCGGTGGGCGTC---CGGAA---AGGGGCGTCCACTCA-CCGG 8009
Query 232 CGGATTG-CAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
|| |||| || ||||| || | || || || ||| ||||||||||
Sbjct 8010 CGAATTGTCATTTTCA-CACGGGCGGGCATGGGCCCTCTGCAGACGAC 8056
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819198277888
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |