Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Herpotrichiellaceae_20sp._20UM238_20[genbank_20GCA_5F000315175.1_202 012-11-26] 217 sequences; 28,364,325 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq188 228 1e-57 >seq188 Length=8484 Score = 228 bits (252), Expect = 1e-57 Identities = 230/288 (80%), Gaps = 21/288 (7%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||||| ||||||||||||||||||||||||||||||| | Sbjct 7780 GTACGAGAGGAACCGTTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGACCAGGCATT 7837 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||| |||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct 7838 GCCGCGACGCTACCATCTGCCGGATTATGGCTGAACGCCTCTAAGTCAGAATCCGTGCCG 7897 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTC--GGCCCCGA 178 ||||||| | ||| || |||| |||||| ||||||||||||||| || |||| || Sbjct 7898 GAACGGGACCTTACTC-CCCGCACGTCGTAGACGGATACGAATAGGCCTCCGGGCCACGC 7956 Query 179 ACCTTAGCAGGCCGGCAAC---GGGCGTCCCGCGGAAGCGCGGGGCG----CTCAGCTGG 231 ||| | ||||| || | | ||||||| ||||| |||||| |||| | || Sbjct 7957 ACCCCAACAGGCTGGTACCGGTGGGCGTC---CGGAA---AGGGGCGTCCACTCA-CCGG 8009 Query 232 CGGATTG-CAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 || |||| || ||||| || | || || || ||| |||||||||| Sbjct 8010 CGAATTGTCATTTTCA-CACGGGCGGGCATGGGCCCTCTGCAGACGAC 8056 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819198277888