Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Herpotrichiellaceae_20sp._20UM238_20[genbank_20GCA_5F000315175.1_202
012-11-26] 217 sequences; 28,364,325 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq123 250 2e-61
seq85 181 8e-41
>seq123
Length=109856
Score = 250 bits (276), Expect = 2e-61
Identities = 1206/1882 (64%), Gaps = 58/1882 (3%)
Strand=Plus/Minus
Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137
|| || ||||| ||||| | || ||| ||| |||| | ||||||||||||||| |||
Sbjct 49211 TCAACGGTGAATTGGATTGGCGCAGAAGCAGCCATGGTTCGAAGATAGTACATGCCAGTC 49152
Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGC--ATAATTCGGCT 65195
||||| || ||| || ||| ||||| || | | || |||| || || || |
Sbjct 49151 TTGAGACCCATTTTCCAGCCAGCGAAGTGCATAGAAG-TGATCTTGCCCATGGTT-GGTT 49094
Query 65196 CGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCA 65255
| || ||| || ||||||||||| |||||| ||| | ||| ||||| || ||||
Sbjct 49093 CCTTCAGATGAATGTTCAACGACTGTGACTGATCAATGAAGGCACCTCGATCAGCGGCCA 49034
Query 65256 TGTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAG-GCGACGTACCTCA 65314
| | |||||| | || ||||||||||| |||||||| || || | | ||
Sbjct 49033 TCTGGATGATAGTTCTCTGAGAGATCTCCCAGACAGTCTTGTAGAGTGCTTTG-ATGTCG 48975
Query 65315 ATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCATC 65374
||||||| | | || ||| | |||||| | ||||| || | || |||
Sbjct 48974 GTTGGAATGTTTGGTACGTTCTGAATTGAACCGCCCTCGGCAATGATTCTGTTCTTCATG 48915
Query 65375 GACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACTTGG 65434
|| ||||||| || | ||| | |||| || | || |||||| ||| ||
Sbjct 48914 TTGTCCGACCACAGGCCAAGATCAACGAGATCTTTGAGCAGCCATGGATTGACGACCTGA 48855
Query 65435 AACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATTCA 65494
|| ||||| | | ||||||||| ||||||||||| || || || ||| |||||
Sbjct 48854 AATTCGCCTGCTAACACACGACGGGAGTAGATGTTGGATGTATATGGCTCGAAGCATTCA 48795
Query 65495 GTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTTT 65554
| ||||| | || || | ||||| || || |||||||| ||||| | | || |||
Sbjct 48794 TTATTGCCCAATATCTGCGACGTAGAGGCGGTCGGCATGGGTGCGACAAGAAGAGAATTT 48735
Query 65555 CGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACA--TCGGTTTAT 65612
|| | || | | |||| ||| ||| | ||||||| ||| | || ||| |
Sbjct 48734 CGAACACCATACTGAGCAATCTTGGCTTTCAAGGCCTCCCAGTCCCAAAGGTCTGTTGGT 48675
Query 65613 CGTC-GACATCCACGGGCCACATATCCTGTTGCAGGG-TTCCGATACTGGCCGGTGAACC 65670
||| ||| ||| || | | |||| || | || || | ||| | |
Sbjct 48674 -GTCAGACC-CCAGAGGTCGTA----CTGTAGCTGACCTTGAGAAATGGGCGAGCCCTCA 48621
Query 65671 GAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACA-GCTGGTCTCGAGTGCGG 65729
||| | ||||| || ||||| ||||| | ||| | | | || || || |
Sbjct 48620 TAGG----TTTCGTATGGACCAAGTTCCTTCGCAAGGTCACATGAAGCTGTC-AGAGCTG 48566
Query 65730 CAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTACG 65789
| || || |||||||| || | || || | | ||| || ||| |||
Sbjct 48565 CGTGGTAGATAGTCTCGAATATTTGAATGTTGAGCTGTCTTGCTTCGGGAGAATCGAACG 48506
Query 65790 GCATACCCATCAGGACAA---AAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGAC 65846
||| | | ||| ||| ||| || || || |||||||| |||| ||| ||||| |
Sbjct 48505 GCAGTC---TAAGGGCAAGGAAAGCATCAGCAAGGCCTTGAACACCAAGACCAATGGGTC 48449
Query 65847 GATGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGC 65906
| || | || ||| |||||| || || || |||||||| ||||| ||||| ||
Sbjct 48448 GGTGTCTGAAGTTGCTCTTTCTCGCTTCCGGGACGGGGTAGTAGTTGATCTCGATGATCT 48389
Query 65907 GATTCAAATTGCGTGTCACCACATGCACGATA-CGTCGCAATTGTTCGAAATCAAAATGT 65965
|||| || |||| || || | || ||| ||| | | | || ||| | ||
Sbjct 48388 TGTTCAGGTTCTTAGTCATGACCTGGATGACCTCGT-GCAGTCGGCCAAAGTCATATTG- 48331
Query 65966 TTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTG 66025
|| ||| | | || || | ||| ||| || | ||| ||| || | |||
Sbjct 48330 -----ACCTTCG--ACTT--GGTCAACG-AAAGATGGCAAAG-CAACAGAAGCCAAATTG 48282
Query 66026 CAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAG 66085
||||| || | ||||||||| ||||| ||||| | ||||| ||||||| || | |
Sbjct 48281 CAGACGGCGACCTCGTCAGGGGCGGTGTACTCAATGATTTCTGTGCACAAGTTGGAGGAC 48222
Query 66086 CGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATG 66145
||||||||||| |||| |||||||| || | ||||| || |||||||| | ||||
Sbjct 48221 TTGATGGTGCCCAAGTTCTTCTGATTACTTTTTCTGTTGCAGGCGTCCTTGTAGAGCATG 48162
Query 66146 TACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTC 66205
| || | || |||||| |||| ||| | |||||| | ||| | |||||||
Sbjct 48161 AATGGGTTTCCAGTCTCAGTCTGGGCCTCCAAGATGGCATACCACAACTTCTGTGCCTTG 48102
Query 66206 ACCGTACGTACCGCCCTACCTTTGCGT-TCGTAATGTTCGTAGAGGTGTTCGAAGGATTC 66264
| || || | ||| | || | | || || | ||| | || ||||| ||
Sbjct 48101 ATTGTCTGT-CGGCCTCGGCCTTCCTTCTCATACTTCTCGAACAGAGCCTCGAACTCCTC 48043
Query 66265 ACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATC 66324
||| | || || | || |||| | || || || | || | ||| || || |
Sbjct 48042 ACCGTAGCAGTCAGATAAACCTGGAGCTTCGTTGGGGCAGAAGAGAGTCCAGTCTCCGTT 47983
Query 66325 CTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGC 66384
| || || || ||| || ||||| || ||||||| ||||| || | ||| || ||
Sbjct 47982 TTTCTCAACCCGCTTCATGAACAGATCTGGAGTCCAGAGAGCGTAAAACAAATCACGAGC 47923
Query 66385 TCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATG 66444
|| || || | ||||| || || || | || || ||||||||| ||||| ||
Sbjct 47922 ACGAACTTCTTCCTTTCCGTGGTTCTTCCGGAGGTTCAGCCACTCAAAGACATCGGCGTG 47863
Query 66445 CCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTA 66504
||| || || ||||| | ||| || | || | ||| ||| || |||||||||||
Sbjct 47862 CCAGGGCTCAAGGTAAACGGCAAAGGCACCAGGTCTCTTGTTGCCGCCCTGGTCGACGTA 47803
Query 66505 GCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGT 66564
||||| ||||| ||||| || | ||| || || || ||||| ||| |||| || ||
Sbjct 47802 TCGAGCAGTATTGTCAAAGACTCGGAGCATAGGGACAAGGCCGTTTGATGTGCCGTTTGT 47743
Query 66565 GCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGC 66624
||| |||| ||| || || || || | ||| || |||| |||||||| |||||
Sbjct 47742 GCCTGCGATATAGGAGCCAGTCGCTCGAATTTTGTGGACGTTCAATCCAATACCGCCGGC 47683
Query 66625 CGTCTTCGAGATGGCAGCACAATCGGCC---ACTGTCCGGAATATGCCGTCAATGGAGTC 66681
|||| ||||| || || || | | || | | || || || || |||||
Sbjct 47682 ATTCTTTGAGATCATGGCGCA---GGTCTTTAGCGTATCGTAGATTCCCTCGATCGAGTC 47626
Query 66682 ACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAA 66741
|||| ||| | | | | ||||| | ||| | || |||||| | || |||
Sbjct 47625 CTCCTTCATGTCGATCAAGAAACATGATGACATTTGAGCATTTGGTGTGCCTGCATTGAA 47566
Query 66742 GAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGAC 66801
||||||||| | |||||| || || | | |||||| |||||| ||||| |||||
Sbjct 47565 GAGGGTGGGCGAAGCGTGTGTGAACATCTTCTGGGACATGAGATTGTATGTCTCAATGAC 47506
Query 66802 AGCATCAATGTTTTCGCCATGAATCCCGAGTG-CACATCGCATCAGGAGGTATTGAGGCC 66860
|| || | ||| |||||||| || | | ||| |||||||| | || || || |
Sbjct 47505 CTTCTCGATATCTTCTCCATGAATGCCAACAGACAC-GCGCATCAGCATGTGCTGTGGTC 47447
Query 66861 GTTCGACCAGCCGATCCTTG--ATATGCATTAAG-TAGGAGCGTTCCAGGGTCTTGATAC 66917
||| ||| | | |||| |||| ||| || || | |||||| ||||||| |
Sbjct 47446 TTTC--CCA-TGGCTTCTTGTCATATTTGAGAAGATATGATCTTTCCAGTGTCTTGAAGC 47390
Query 66918 CAAAGTACGAGTAATTGAAATC 66939
|||| || ||| || |||||
Sbjct 47389 CAAAATAGTTGTAGTTAAAATC 47368
>seq85
Length=245923
Score = 181 bits (200), Expect = 8e-41
Identities = 551/841 (66%), Gaps = 14/841 (2%)
Strand=Plus/Minus
Query 61099 TACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATG 61158
||||| || || ||||| ||||||||||| | || || ||||| |||| ||||| |
Sbjct 84986 TACAAGAAAGCCGAAGCCTCCTTCTGGACCGCCGAAGAAGTCGACCTGTCGAAAGATCTC 84927
Query 61159 AATGACTGGGAGC----GTTTATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGC 61214
| |||||| | | | | | ||| | |||| | ||| || || || | ||
Sbjct 84926 CACGACTGGCACCACAAGCTCAACGAT-GACGAACGTTACTTCGTTTCCCACGTCCTCGC 84868
Query 61215 GTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGA 61274
||||| ||||| |||||||| |||||||| ||||| | | || || ||| | ||
Sbjct 84867 TTTCTTCGCCGCCTCGGACGGCATCGTCAACGAGAACCTTGTCGAGCGCTTCTCCGGCGA 84808
Query 61275 GGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCA 61334
|| ||||| | || || || || || || ||||||||||| ||||| || ||||
Sbjct 84807 AGTCCAAGTCCCCGAAGCCCGCTGCTTTTATGGCTTCCAGATCATGATGGAAAACATCCA 84748
Query 61335 CTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACG 61394
| || |||||| ||||||| || || ||||| | |||| | || | ||
Sbjct 84747 CAGCGAAATGTACTCACTTCTCATTGACACATACATTAAAGAGCCAAAGCAAAGACAATA 84688
Query 61395 ATTGTTCAATGCCATCGAGACGATACC-GGCGGT-GAAGCGGAAAGCGGATTGGGCCTTC 61452
| ||| | |||||||| || || || || | ||| |||||| || ||||| ||
Sbjct 84687 CCTCTTCGACGCCATCGATACAATTCCTTGCATTAGAA--AGAAAGCTGAATGGGCTCTC 84630
Query 61453 AATTGGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTC 61512
||||| | | | | | || |||| | || || | || ||||| | ||
Sbjct 84629 CGCTGGATTTCAGATCGAGAGTCCACCTTTGCCCAGCGTCTGGTCGCCTTTGCCGCTGTG 84570
Query 61513 GAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTT 61572
|| ||| | || ||| || || || ||| | ||||| ||| | ||||| || || ||
Sbjct 84569 GAAGGTATCTTCTTCTCCGGCTCCTTCGCCTCCATCTTCTGGCTCAAGAAGCGAGGTCTC 84510
Query 61573 ATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGAT 61632
|||||||| || |||||| ||| || | || || || |||||||||||||| ||
Sbjct 84509 ATGCCCGGCCTTACCTTCTCCAACGAACTTATCTCCCGGGACGAGGGCATGCACACCGAC 84450
Query 61633 TTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAGGAGCGTGTGGGT 61692
||||| |||| || ||| | || | || || || |||| | | |
Sbjct 84449 TTTGCGTGCCTGCTGCTC--TCGC-ACCTTAACCACCGCCCCTCAAAGGAACTTATCCAG 84393
Query 61693 GAGATTGTTCGT-GAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGT 61751
| | | |||| ||||| || ||||| || ||||| || || || || | |||||
Sbjct 84392 GCCA-TCATCGTCGAGGCCGTCCAGATCGAGCAAGAATTCCTCACCGAGGCGCTCCCCGT 84334
Query 61752 CTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCG 61811
| || | |||||||| | || ||| |||||| ||||| || |||||||||||
Sbjct 84333 TGCTCTACTGGGCATGAACTCGAAGCTCATGAAGCAGTACATTGAGTTCGTTGCCGACCG 84274
Query 61812 TCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAACCCATTTGATTTCAT 61871
|||||||| | |||||| | | ||| || | || || ||||| || ||
Sbjct 84273 GCTGTTGGTAAGTATGGGTAACCCGAAGTACTACAAGGTCACCAATCCGTTTGACTTTAT 84214
Query 61872 GGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGTAGGCGACTATCA 61931
||| | || || || | |||||||| ||||| |||||||| || || || ||||| ||
Sbjct 84213 GGAGAACATCTCTCTAGCGGGCAAGACCAATTTCTTCGAGAAGCGAGTGGGTGACTACCA 84154
Query 61932 A 61932
|
Sbjct 84153 A 84153
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397566948556880
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