Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Huntiella_20bhutanensis_20[genbank_20GCA_5F002018275.1_202017-03-03] 448 sequences; 26,695,738 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq49 376 5e-102 >seq49 Length=38520 Score = 376 bits (416), Expect = 5e-102 Identities = 273/314 (87%), Gaps = 3/314 (1%) Strand=Plus/Minus Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64 ||||||||||| |||||| ||| ||| || ||||| |||| | ||||| ||||| Sbjct 5236 TGGTCCGGCCGAATCTTTCCCTCTATGGAACCTCATGCTCTTCG--GAGTGTGTTGGGGA 5179 Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124 ||||||||||||||||||||||||||||| || | |||||||| |||||||||| Sbjct 5178 AATAGGACTTTTACTTTGAAAAAATTAGAGTGCTCCAGGCAGGCCTATGCTCGAATAGTA 5119 Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 184 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 5118 CAGCATGGAATAATAGAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 5059 Query 185 AATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 244 ||||||||||||||| ||||||||| |||||||||| ||||||||||||||||||||| Sbjct 5058 AATGATTAATAGGGACAGTCGGGGGCATCAGTATTCAGCTGTCAGAGGTGAAATTCTTGG 4999 Query 245 ATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGA 304 || | ||||||||||||||||||||||| || ||||||||||||||||| || || || Sbjct 4998 ATCTGCTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTGATAAG-GA 4940 Query 305 ACGAAAGTTAGGGG 318 |||||||||||||| Sbjct 4939 ACGAAAGTTAGGGG 4926 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915195899904