Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Huntiella_20bhutanensis_20[genbank_20GCA_5F002018275.1_202017-03-03]
448 sequences; 26,695,738 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq49 630 3e-178
>seq49
Length=38520
Score = 630 bits (698), Expect = 3e-178
Identities = 542/662 (82%), Gaps = 20/662 (3%)
Strand=Plus/Minus
Query 28 AGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTT 87
||||||||||||||||||||| |||||||||||| ||||||||||||||||| || ||||
Sbjct 3406 AGCTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATGGGAGGTATATCTCTT 3347
Query 88 CTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAA 147
|||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 3346 CTAAAGCTAAATATAGGCTAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAA 3287
Query 148 AGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAAC 207
||||||||| ||||||||||||| ||||||||||||||||||||||||||||| | ||
Sbjct 3286 AGCACTTTGAAAAGAGAGTTAAACAGCACGTGAAATTGTTGAAAGGGAAGCGCCTATGAC 3227
Query 208 CAGACTTG---CCCGCAGTTGCTCAACCGGCCCCTCGGCCGG-TGCACTCTTCTGCGGTC 263
|||||||| | ||||| | |||| | | | ||||| | | |
Sbjct 3226 CAGACTTGTTTCTATCAGTTTTGGTAGTTT----TCGGACTGCTTTACTCTGTTA-GTAC 3172
Query 264 AGGCCAGCATCAGCTCG--GGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGG 321
|||||| |||||| | | | ||| ||| ||||| ||||||||||| || || ||
Sbjct 3171 AGGCCAACATCAGTTTGTTGTCGG--GGAGAAAGGTTTAGGGAATGTGGCTCC--TCCGG 3116
Query 322 GGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTAG 381
| |||||||||||| ||| | || | |||||||| ||||||| |||| ||
Sbjct 3115 GAGTGTTATAGCCCTTTACATAATACCCTTCGGC-AGACTGAGGACCGCGCTTCGGCAAG 3057
Query 382 GATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACAT 441
|||| |||||||||||| | |||| ||||||||| |||||||||||||||||| | | |
Sbjct 3056 GATGTTGGCGTAATGGTCATCAGCGACCCGTCTTGAAACACGGACCAAGGAGTCAACCTT 2997
Query 442 CTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAAC 501
||||||||||||||||||| |||||| |||||||||||| ||||||| ||||| ||
Sbjct 2996 ATATGCGAGTGTTTGGGTGTTAAACCCCAGCGCGTAATGAACGTGAACGTAGGTGAGA-- 2939
Query 502 CCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATA 561
| || ||| ||||||||||| ||||||| |||||||||||||||||||||||||
Sbjct 2938 --GCTTCGGCGCATCATCGACCGATTCTGATGTTCTCGGATGGATTTGAGTAAGAGCATA 2881
Query 562 GCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTC 621
| | |||||||||||| |||||||||||| || ||||||||||||||||||||||||
Sbjct 2880 TAGGGTTGGACCCGAAAGAAGGTGAACTATGCTTGTATAGGGTGAAGCCAGAGGAAACTC 2821
Query 622 TGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGC 681
|||||||||||||||||||||||| ||||||||||||||||||||| || | || |||||
Sbjct 2820 TGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATATGAGCATGGGGGC 2761
Query 682 GA 683
||
Sbjct 2760 GA 2759
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079990390400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |