Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Huntiella_20bhutanensis_20[genbank_20GCA_5F002018275.1_202017-03-03]
448 sequences; 26,695,738 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq405 253 2e-62
>seq405
Length=464752
Score = 253 bits (280), Expect = 2e-62
Identities = 632/955 (66%), Gaps = 20/955 (2%)
Strand=Plus/Minus
Query 66014 GATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCAC 66073
|| || | |||||| ||||| | ||| ||||||||| ||||||| ||| || |||||
Sbjct 119402 GACGCCAAGTTGCACACAGCGACCTCATCAGGAGCGCAGTACTCGATAATCTCAGTGCAA 119343
Query 66074 AGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCC 66133
|| || | ||| ||||| |||| |||| || ||||||||||| ||||| ||||
Sbjct 119342 AGGTTGGAACTGCGAATGGTTCCCAGGTTCTTCTGGTTACTCTTGCGGTTGCAGTGATCC 119283
Query 66134 TTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGA 66193
||||||| |||| | || | || |||||| || | || | || || | ||| ||
Sbjct 119282 TTGTACAACATGAAAGGGTTACCAGTCTCAGTCTGAGCTTCCAGAATAGCATACCACAGC 119223
Query 66194 GCGCGTGCCTTCACCGTACGTACCGCC-CTACCTTTGCGTTCGTAATGTTCGTAGAGGTG 66252
| ||||| | ||| | || ||| | |||| || ||||| | ||||||
Sbjct 119222 TTCTGAGCCTTGATGGTAAG-ACGGCCACGTCCTTCCCGCTCGTACTTGATGTAGAGAGC 119164
Query 66253 TTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGA 66312
|| || ||||| | || | | | || |||| || || ||||| || |
Sbjct 119163 CTCAAATTCCTCACCGTAGCAATCAGCTAAGCCAGGGCACTCGTTGGGGCACATGAGGGT 119104
Query 66313 CCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAA 66372
||| || || | || || ||||| ||| || | ||| || ||||| ||||| |||
Sbjct 119103 CCATTCGCCGTTCTTCTCAACACGCTTCATGAACAAATCGGGGATCCACAGGGCAAGGAA 119044
Query 66373 GAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAA 66432
| |||||| || || |||||| | ||||| || || || | ||| |||||||||||
Sbjct 119043 CAAATCGCGGGCGCGAATCTCCTCCTTACCGTGGTTCTTCCGGAGGTCAAGGAACTCAAA 118984
Query 66433 GATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACC 66492
| || || ||||| || |||||||| ||||| || | || ||| ||| |||||
Sbjct 118983 CACATCAGCGTGCCACGGCTCCAGGTAAATGGCAAAAGCACCAGGACGCTTGTTACCACC 118924
Query 66493 TTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGA 66552
|| |||||||| ||||| |||||||||||||||| ||| || || | ||||| ||
Sbjct 118923 CTGATCGACGTAACGAGCAGTGTTGTTGAAGACACGCAGCATAGGAACAATGCCGTTCGA 118864
Query 66553 TTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACC 66612
| || ||||||||| | ||| ||| || || || ||| ||| | || |||||
Sbjct 118863 GGTACCGTTGGTGCCGGCAATGTAGGAACCAGTAGCACGGATACGGTGGGCGTTGAGACC 118804
Query 66613 AATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGCC---ACTGTCCGGAATATGCC 66669
|||||||| ||| |||| ||||| |||||| || | | || | || ||
Sbjct 118803 GATACCACCCGCCATCTTGGAGATCATAGCACA---GGTCTTGAGGGTATCATAGATACC 118747
Query 66670 GTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGT 66729
|| || ||| |||| ||| | | | |||| ||| ||| || || | || ||
Sbjct 118746 TTCGATACTGTCTTCCTTCATGTCTACCAAGAAGCAGGAAGAAAGCTGAGGCTGAGGGGT 118687
Query 66730 GGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTA 66789
|||| ||||||||| || | ||||| || ||| | | || |||||| |||||
Sbjct 118686 ACCGGCGTTGAAGAGGGTAGGAGAGGCGTGAGTGAAGAACTTGCTCGACATGAGGTTGTA 118627
Query 66790 CGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAG 66849
|| || | ||| |||| || || || ||| |||| ||| ||||| | |
Sbjct 118626 AGTTTCCAGAACACGCTCAACATTATCACCCCAAATACCGACAGCAACACGCATAATCAT 118567
Query 66850 GTATTGAGGCCGTTCGACCAGC---CGATC---CTTGATATGCATTAAGTAGGAGCGTTC 66903
|| ||||| || ||||| | | | ||| ||||| | | ||| || | ||
Sbjct 118566 GTGCTGAGGACGCTCGACAATCTTGCCATCAAGCTTGAGA------AGGTAAGATCTCTC 118513
Query 66904 CAGGGTCTTGATACCAAAGTACGAGTAATTGAAATCGTTAGCATGCACGATGGCC 66958
|| |||||||| ||||||||| ||| ||||| ||| ||| || ||||||
Sbjct 118512 CAAGGTCTTGAATCCAAAGTACTGGTAGTTGAAGTCGCGGTCATATACAATGGCC 118458
Score = 136 bits (150), Expect = 3e-27
Identities = 332/495 (67%), Gaps = 10/495 (2%)
Strand=Plus/Minus
Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136
||| || ||||||||||| | | |||||| || | ||| | || |||||||| || ||
Sbjct 120321 ATCAACAGTGAACTGGATAGGAGCAGCAGCGGCTTGGGTACGCAGGTAGTACATACCCGT 120262
Query 65137 CTTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGC--ATAATTCGGC 65194
|||||| ||| |||| | || ||||| | || |||| |||| || || ||
Sbjct 120261 CTTGAGACCAAGCTTCCAACCCGCAAAGTGCAT-GCTGGTAATCTTGCCCATGGTTGGG- 120204
Query 65195 TCGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCC 65254
|| || || || |||||||||||| |||||| || | |||||| || ||||||
Sbjct 120203 TCCTTCATGTGAATGTTCAACGACTGAGACTGATCAATAAAGGCACCACGGTCAGCAGCC 120144
Query 65255 ATGTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGT-ACCTC 65313
|| | || | | ||| || |||||||| || |||||||||| | ||| | | ||
Sbjct 120143 ATCTGAACAACAGTACGCTGAGAAATCTCCCAAACAGTCTTGTACA-GAGACTTGATGTC 120085
Query 65314 AATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGT--GCAATAATGCGATTACGC 65371
||||| |||| ||| || |||| || || | ||| ||||| || |
Sbjct 120084 CGCGGGAATGCTGGGGATGTTCTGAACAGAAC--CGTTGTCCGAAATGATGCGGTTCTTC 120027
Query 65372 ATCGACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACT 65431
|| || ||||||| ||| | || | ||| | ||| ||| | | |||| ||
Sbjct 120026 ATGTTATCCGACCACAGACCAAGGTCAACAAGGTCGCGAAGCAACCAAGGGTTGACAACC 119967
Query 65432 TGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGAT 65491
|||||||| || | || ||||| || || ||||| || ||| || || ||| |
Sbjct 119966 TGGAACTCACCAGCCAACACACGGCGCTGGTAAATGTTTGAAGTGTAAGGCTCGAAGCAC 119907
Query 65492 TCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAG 65551
|| |||| || ||||| |||| ||| || ||||| |||||||| || || | || |||
Sbjct 119906 TCGTTGTTACCCAGAATCTGGGAAGTTGAGGCAGTGGGCATGGGCGCCACAAGCAGCGAG 119847
Query 65552 TTTCGCAATCCGTTC 65566
|| || | ||||||
Sbjct 119846 TTGCGAACACCGTTC 119832
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397565829278720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |