Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Huntiella_20bhutanensis_20[genbank_20GCA_5F002018275.1_202017-03-03] 448 sequences; 26,695,738 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq405 253 2e-62 >seq405 Length=464752 Score = 253 bits (280), Expect = 2e-62 Identities = 632/955 (66%), Gaps = 20/955 (2%) Strand=Plus/Minus Query 66014 GATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCAC 66073 || || | |||||| ||||| | ||| ||||||||| ||||||| ||| || ||||| Sbjct 119402 GACGCCAAGTTGCACACAGCGACCTCATCAGGAGCGCAGTACTCGATAATCTCAGTGCAA 119343 Query 66074 AGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCC 66133 || || | ||| ||||| |||| |||| || ||||||||||| ||||| |||| Sbjct 119342 AGGTTGGAACTGCGAATGGTTCCCAGGTTCTTCTGGTTACTCTTGCGGTTGCAGTGATCC 119283 Query 66134 TTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGA 66193 ||||||| |||| | || | || |||||| || | || | || || | ||| || Sbjct 119282 TTGTACAACATGAAAGGGTTACCAGTCTCAGTCTGAGCTTCCAGAATAGCATACCACAGC 119223 Query 66194 GCGCGTGCCTTCACCGTACGTACCGCC-CTACCTTTGCGTTCGTAATGTTCGTAGAGGTG 66252 | ||||| | ||| | || ||| | |||| || ||||| | |||||| Sbjct 119222 TTCTGAGCCTTGATGGTAAG-ACGGCCACGTCCTTCCCGCTCGTACTTGATGTAGAGAGC 119164 Query 66253 TTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGA 66312 || || ||||| | || | | | || |||| || || ||||| || | Sbjct 119163 CTCAAATTCCTCACCGTAGCAATCAGCTAAGCCAGGGCACTCGTTGGGGCACATGAGGGT 119104 Query 66313 CCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAA 66372 ||| || || | || || ||||| ||| || | ||| || ||||| ||||| ||| Sbjct 119103 CCATTCGCCGTTCTTCTCAACACGCTTCATGAACAAATCGGGGATCCACAGGGCAAGGAA 119044 Query 66373 GAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAA 66432 | |||||| || || |||||| | ||||| || || || | ||| ||||||||||| Sbjct 119043 CAAATCGCGGGCGCGAATCTCCTCCTTACCGTGGTTCTTCCGGAGGTCAAGGAACTCAAA 118984 Query 66433 GATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACC 66492 | || || ||||| || |||||||| ||||| || | || ||| ||| ||||| Sbjct 118983 CACATCAGCGTGCCACGGCTCCAGGTAAATGGCAAAAGCACCAGGACGCTTGTTACCACC 118924 Query 66493 TTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGA 66552 || |||||||| ||||| |||||||||||||||| ||| || || | ||||| || Sbjct 118923 CTGATCGACGTAACGAGCAGTGTTGTTGAAGACACGCAGCATAGGAACAATGCCGTTCGA 118864 Query 66553 TTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACC 66612 | || ||||||||| | ||| ||| || || || ||| ||| | || ||||| Sbjct 118863 GGTACCGTTGGTGCCGGCAATGTAGGAACCAGTAGCACGGATACGGTGGGCGTTGAGACC 118804 Query 66613 AATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGCC---ACTGTCCGGAATATGCC 66669 |||||||| ||| |||| ||||| |||||| || | | || | || || Sbjct 118803 GATACCACCCGCCATCTTGGAGATCATAGCACA---GGTCTTGAGGGTATCATAGATACC 118747 Query 66670 GTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGT 66729 || || ||| |||| ||| | | | |||| ||| ||| || || | || || Sbjct 118746 TTCGATACTGTCTTCCTTCATGTCTACCAAGAAGCAGGAAGAAAGCTGAGGCTGAGGGGT 118687 Query 66730 GGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTA 66789 |||| ||||||||| || | ||||| || ||| | | || |||||| ||||| Sbjct 118686 ACCGGCGTTGAAGAGGGTAGGAGAGGCGTGAGTGAAGAACTTGCTCGACATGAGGTTGTA 118627 Query 66790 CGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAG 66849 || || | ||| |||| || || || ||| |||| ||| ||||| | | Sbjct 118626 AGTTTCCAGAACACGCTCAACATTATCACCCCAAATACCGACAGCAACACGCATAATCAT 118567 Query 66850 GTATTGAGGCCGTTCGACCAGC---CGATC---CTTGATATGCATTAAGTAGGAGCGTTC 66903 || ||||| || ||||| | | | ||| ||||| | | ||| || | || Sbjct 118566 GTGCTGAGGACGCTCGACAATCTTGCCATCAAGCTTGAGA------AGGTAAGATCTCTC 118513 Query 66904 CAGGGTCTTGATACCAAAGTACGAGTAATTGAAATCGTTAGCATGCACGATGGCC 66958 || |||||||| ||||||||| ||| ||||| ||| ||| || |||||| Sbjct 118512 CAAGGTCTTGAATCCAAAGTACTGGTAGTTGAAGTCGCGGTCATATACAATGGCC 118458 Score = 136 bits (150), Expect = 3e-27 Identities = 332/495 (67%), Gaps = 10/495 (2%) Strand=Plus/Minus Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136 ||| || ||||||||||| | | |||||| || | ||| | || |||||||| || || Sbjct 120321 ATCAACAGTGAACTGGATAGGAGCAGCAGCGGCTTGGGTACGCAGGTAGTACATACCCGT 120262 Query 65137 CTTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGC--ATAATTCGGC 65194 |||||| ||| |||| | || ||||| | || |||| |||| || || || Sbjct 120261 CTTGAGACCAAGCTTCCAACCCGCAAAGTGCAT-GCTGGTAATCTTGCCCATGGTTGGG- 120204 Query 65195 TCGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCC 65254 || || || || |||||||||||| |||||| || | |||||| || |||||| Sbjct 120203 TCCTTCATGTGAATGTTCAACGACTGAGACTGATCAATAAAGGCACCACGGTCAGCAGCC 120144 Query 65255 ATGTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGT-ACCTC 65313 || | || | | ||| || |||||||| || |||||||||| | ||| | | || Sbjct 120143 ATCTGAACAACAGTACGCTGAGAAATCTCCCAAACAGTCTTGTACA-GAGACTTGATGTC 120085 Query 65314 AATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGT--GCAATAATGCGATTACGC 65371 ||||| |||| ||| || |||| || || | ||| ||||| || | Sbjct 120084 CGCGGGAATGCTGGGGATGTTCTGAACAGAAC--CGTTGTCCGAAATGATGCGGTTCTTC 120027 Query 65372 ATCGACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACT 65431 || || ||||||| ||| | || | ||| | ||| ||| | | |||| || Sbjct 120026 ATGTTATCCGACCACAGACCAAGGTCAACAAGGTCGCGAAGCAACCAAGGGTTGACAACC 119967 Query 65432 TGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGAT 65491 |||||||| || | || ||||| || || ||||| || ||| || || ||| | Sbjct 119966 TGGAACTCACCAGCCAACACACGGCGCTGGTAAATGTTTGAAGTGTAAGGCTCGAAGCAC 119907 Query 65492 TCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAG 65551 || |||| || ||||| |||| ||| || ||||| |||||||| || || | || ||| Sbjct 119906 TCGTTGTTACCCAGAATCTGGGAAGTTGAGGCAGTGGGCATGGGCGCCACAAGCAGCGAG 119847 Query 65552 TTTCGCAATCCGTTC 65566 || || | |||||| Sbjct 119846 TTGCGAACACCGTTC 119832 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397565829278720