Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Huntiella_20bhutanensis_20[genbank_20GCA_5F002018275.1_202017-03-03]
448 sequences; 26,695,738 total letters
Query= NC_032108.1
Length=589068
Score E
Sequences producing significant alignments: (Bits) Value
seq46 102 3e-16
seq446 86.0 2e-11
>seq46
Length=346326
Score = 102 bits (112), Expect = 3e-16
Identities = 214/317 (68%), Gaps = 4/317 (1%)
Strand=Plus/Minus
Query 12731 AGAACATCGTAAAAGAAAACTTTCATGCCTAGACACTCTGCTAGGACAGAGACCTGAGAA 12790
||||||||||| ||| || |||||||| | | ||| || || || || | ||| | |
Sbjct 53223 AGAACATCGTAGTAGATGACGTTCATGCCCATAGCCTCAGCGAGAACGGAAAGCTGGGCA 53164
Query 12791 CCAATGTTACCATAACCTACTATACCTAGGGTCTTTCCTCTAACTTCACGGCAACCTTGA 12850
||||||| || ||||| | ||||| |||||||| || | | || | ||| ||||
Sbjct 53163 CCAATGTGGCCGTAACCGATGATACCAAGGGTCTTGCCACGGATCTCCCAGCA--CTTGT 53106
Query 12851 --GAAGTCTTGTTCCAAATGCCTTGGTGTAGTTCTTTGTTTCTATCTCCAACCTGACGAG 12908
|| ||||||||| | || |||| | || | | || |||| ||| ||||
Sbjct 53105 TGGAGACCTTGTTCCAGGTACCACGGTGCATCTCAAGGGAGCGGTCACCAAGCTGGCGAG 53046
Query 12909 AAAGATTAATTAGTTGTCCTATGATGAGCTCTGCCACGCTTCTAGTGTTGCAAAAGGGAG 12968
||| ||| | | || |||| |||||| || ||| | || |||| ||||||||
Sbjct 53045 CCAGAGAAATGATCTCACCGATGACGAGCTCAGCAACGGAACGAGAGTTGGCAAAGGGAG 52986
Query 12969 AATTAAAGACTGCAATGCCTAGTTTGGTAGCCATGTCTAGATTAACCTGATCGTAACCAA 13028
| || ||||| ||||| || | |||| || || || | ||||| | |||||
Sbjct 52985 AGTTGAAGACGGCAATACCGCGCTTGGCGGCGTATTCGAGGTCGACCTGGTTAGTACCAA 52926
Query 13029 TGCAGAAGCATCCTATG 13045
|||||||||| || |||
Sbjct 52925 TGCAGAAGCAACCGATG 52909
>seq446
Length=87972
Score = 86.0 bits (94), Expect = 2e-11
Identities = 108/146 (74%), Gaps = 2/146 (1%)
Strand=Plus/Plus
Query 364425 CAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCGT 364484
|||| ||||||||||| ||||||| | | ||||| |||||||| || || || || |
Sbjct 32098 CAATGGTCATACGAGAAGGAATGGCGTGGGGGTTAATGATGATATCTGGAGTGATACCCT 32157
Query 364485 CAGCGGTAAAGGGCATATCTTC-GGGAGGAACGATGAGACCAATGGTTCCCTTTTGCGCA 364543
|| ||||| ||||| || || | | | | ||| ||||||||| ||||| || |
Sbjct 32158 CACGAGTAAAAGGCATGTCCTCTTGTCTGTAAG-TGACACCAATGGTACCCTTCTGTCCG 32216
Query 364544 TAGCGAGAAGCAAACTTGTCGCCAAT 364569
| || |||||||||||||| |||||
Sbjct 32217 TGACGGGAAGCAAACTTGTCACCAAT 32242
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1884875580752064
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |