Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Huntiella_20moniliformis_20[genbank_20GCA_5F000712465.1_202014-06-
26] 365 sequences; 25,429,610 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq266 627 4e-177
>seq266
Length=4704
Score = 627 bits (694), Expect = 4e-177
Identities = 542/662 (82%), Gaps = 20/662 (3%)
Strand=Plus/Minus
Query 28 AGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTT 87
||||||||||||||||||||| |||||||||||| ||||||||||||||||| || ||||
Sbjct 2783 AGCTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATGGGAGGTATATCTCTT 2724
Query 88 CTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAA 147
|||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 2723 CTAAAGCTAAATATAGGCTAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAA 2664
Query 148 AGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAAC 207
||||||||| ||||||||||||| ||||||||||||||||||||||||||||| | ||
Sbjct 2663 AGCACTTTGAAAAGAGAGTTAAACAGCACGTGAAATTGTTGAAAGGGAAGCGCCTATGAC 2604
Query 208 CAGACTTG---CCCGCAGTTGCTCAACCGGCCCCTCGGCCGG-TGCACTCTTCTGCGGTC 263
|||||||| | ||||| | |||| | | | ||||| | | |
Sbjct 2603 CAGACTTGTTTCTATCAGTTTTGGTAGTTT----TCGGACTGCTTTACTCTGTTA-GTAC 2549
Query 264 AGGCCAGCATCAGCTCG--GGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGG 321
|||||| |||||| | | | ||| ||| ||||| ||||||||||| | ||||||
Sbjct 2548 AGGCCAACATCAGTTTGTTGTCGG--GGAGAAAGGTTTAGGGAATGTGGCTCT-TTCGGG 2492
Query 322 GGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTAG 381
| ||||||||||| ||| | || | | ||||||| ||||||| |||| ||
Sbjct 2491 AG-TGTTATAGCCCTTTACATAATACCCTTCGGCAG-ACTGAGGACCGCGCTTCGGCAAG 2434
Query 382 GATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACAT 441
|||| |||||||||||| | |||| ||||||||| |||||||||||||||||| | | |
Sbjct 2433 GATGTTGGCGTAATGGTCATCAGCGACCCGTCTTGAAACACGGACCAAGGAGTCAACCTT 2374
Query 442 CTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAAC 501
||||||||||||||||||| |||||| |||||||||||| ||||||| ||||| || |
Sbjct 2373 ATATGCGAGTGTTTGGGTGTTAAACCCCAGCGCGTAATGAACGTGAACGTAGGTGAGAGC 2314
Query 502 CCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATA 561
|| ||| ||||||||||| ||||||| |||||||||||||||||||||||||
Sbjct 2313 TTC----GGCGCATCATCGACCGATTCTGATGTTCTCGGATGGATTTGAGTAAGAGCATA 2258
Query 562 GCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTC 621
| | |||||||||||| |||||||||||| || ||||||||||||||||||||||||
Sbjct 2257 TAGGGTTGGACCCGAAAGAAGGTGAACTATGCTTGTATAGGGTGAAGCCAGAGGAAACTC 2198
Query 622 TGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGC 681
|||||||||||||||||||||||| ||||||||||||||||||||| || | || |||||
Sbjct 2197 TGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATATGAGCATGGGGGC 2138
Query 682 GA 683
||
Sbjct 2137 GA 2136
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079992170750
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |