Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Huntiella_20moniliformis_20[genbank_20GCA_5F000712465.1_202014-06- 26] 365 sequences; 25,429,610 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq266 627 4e-177 >seq266 Length=4704 Score = 627 bits (694), Expect = 4e-177 Identities = 542/662 (82%), Gaps = 20/662 (3%) Strand=Plus/Minus Query 28 AGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTT 87 ||||||||||||||||||||| |||||||||||| ||||||||||||||||| || |||| Sbjct 2783 AGCTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATGGGAGGTATATCTCTT 2724 Query 88 CTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAA 147 |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 2723 CTAAAGCTAAATATAGGCTAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAA 2664 Query 148 AGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAAC 207 ||||||||| ||||||||||||| ||||||||||||||||||||||||||||| | || Sbjct 2663 AGCACTTTGAAAAGAGAGTTAAACAGCACGTGAAATTGTTGAAAGGGAAGCGCCTATGAC 2604 Query 208 CAGACTTG---CCCGCAGTTGCTCAACCGGCCCCTCGGCCGG-TGCACTCTTCTGCGGTC 263 |||||||| | ||||| | |||| | | | ||||| | | | Sbjct 2603 CAGACTTGTTTCTATCAGTTTTGGTAGTTT----TCGGACTGCTTTACTCTGTTA-GTAC 2549 Query 264 AGGCCAGCATCAGCTCG--GGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGG 321 |||||| |||||| | | | ||| ||| ||||| ||||||||||| | |||||| Sbjct 2548 AGGCCAACATCAGTTTGTTGTCGG--GGAGAAAGGTTTAGGGAATGTGGCTCT-TTCGGG 2492 Query 322 GGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTAG 381 | ||||||||||| ||| | || | | ||||||| ||||||| |||| || Sbjct 2491 AG-TGTTATAGCCCTTTACATAATACCCTTCGGCAG-ACTGAGGACCGCGCTTCGGCAAG 2434 Query 382 GATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACAT 441 |||| |||||||||||| | |||| ||||||||| |||||||||||||||||| | | | Sbjct 2433 GATGTTGGCGTAATGGTCATCAGCGACCCGTCTTGAAACACGGACCAAGGAGTCAACCTT 2374 Query 442 CTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAAC 501 ||||||||||||||||||| |||||| |||||||||||| ||||||| ||||| || | Sbjct 2373 ATATGCGAGTGTTTGGGTGTTAAACCCCAGCGCGTAATGAACGTGAACGTAGGTGAGAGC 2314 Query 502 CCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATA 561 || ||| ||||||||||| ||||||| ||||||||||||||||||||||||| Sbjct 2313 TTC----GGCGCATCATCGACCGATTCTGATGTTCTCGGATGGATTTGAGTAAGAGCATA 2258 Query 562 GCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTC 621 | | |||||||||||| |||||||||||| || |||||||||||||||||||||||| Sbjct 2257 TAGGGTTGGACCCGAAAGAAGGTGAACTATGCTTGTATAGGGTGAAGCCAGAGGAAACTC 2198 Query 622 TGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGC 681 |||||||||||||||||||||||| ||||||||||||||||||||| || | || ||||| Sbjct 2197 TGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATATGAGCATGGGGGC 2138 Query 682 GA 683 || Sbjct 2137 GA 2136 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079992170750