Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Huntiella_20moniliformis_20[genbank_20GCA_5F000712465.1_202014-06-
26] 365 sequences; 25,429,610 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq266 767 0.0
seq315 421 2e-115
>seq266
Length=4704
Score = 767 bits (850), Expect = 0.0
Identities = 494/537 (92%), Gaps = 7/537 (1%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 380 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACACCTGCGTTATG 439
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct 440 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGGTC 499
Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186
||||||||||||||||||| |||||| ||| | | ||| |||| |||||| |||
Sbjct 500 GGCCCGCGAAGGACCTTAAGACCAGAAGTTGGACAG--AAGTCCAGCCCCGCTTA--TGA 555
Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246
||||||||||||| ||||| |||||||||||||||| |||||| |||||||| ||
Sbjct 556 ATAAGTAAAAAAACAATAAGAGTAGTGGTATTTCACTGTTGCCGAA---GCTCCCACCTA 612
Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTC 306
|||||||||||| | ||| |||||| | ||| |||||||||||||||||||||||||||
Sbjct 613 TTCTACACCTCTTATGTCTTTTCACCATGTCAAACTAGAGTCAAGCTCAACAGGGTCTTC 672
Query 307 TTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 366
||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||
Sbjct 673 TTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATGGTAGATA 732
Query 367 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 426
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 733 GGGACAGTGGGAATCTCGTTGATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 792
Query 427 TGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCT 486
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
Sbjct 793 TGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGTTTGAATTCCA 852
Query 487 TCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 853 TCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACACCACTTTCTG 909
>seq315
Length=1923
Score = 421 bits (466), Expect = 2e-115
Identities = 293/330 (89%), Gaps = 7/330 (2%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1601 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACACCTGCGTTATG 1660
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct 1661 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGGTC 1720
Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186
||||||||||||||||||| |||||| ||| | |||| |||| |||||| |||
Sbjct 1721 GGCCCGCGAAGGACCTTAAGACCAGAAGTTGGAC--AGAAGTCCAGCCCCGCTT--ATGA 1776
Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246
||||||||||||| ||||| |||||||||||||||| |||||| |||||||| ||
Sbjct 1777 ATAAGTAAAAAAACAATAAGAGTAGTGGTATTTCACTGTTGCCGAA---GCTCCCACCTA 1833
Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTC 306
|||||||||||| | ||| |||||| | ||| |||||||||||||||||||||||||||
Sbjct 1834 TTCTACACCTCTTATGTCTTTTCACCATGTCAAACTAGAGTCAAGCTCAACAGGGTCTTC 1893
Query 307 TTTCCCCGCTGATTCCGCCAAGCCCGTTCC 336
||||||||||||||| ||||||||||||||
Sbjct 1894 TTTCCCCGCTGATTCTGCCAAGCCCGTTCC 1923
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1635194031520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |