Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Huntiella_20moniliformis_20[genbank_20GCA_5F000712465.1_202014-06- 26] 365 sequences; 25,429,610 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq321 574 1e-161 >seq321 Length=1841 Score = 574 bits (636), Expect = 1e-161 Identities = 387/429 (90%), Gaps = 3/429 (1%) Strand=Plus/Minus Query 76 GGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCT 135 ||||||||||||||||||||||||||||| | ||||||||| ||||||||||||||||| Sbjct 1591 GGGTAATTTGCGCGCCTGCTGCCTTCCTTAAAAGTGGTAGCCATTTCTCAGGCTCCCTCT 1532 Query 136 CCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACC 195 |||| |||| |||||| | ||||||||||||| |||||| | | || | | | | Sbjct 1531 CCGGGGTCGAGCCCTAACCCTCCGTTACCCGTTGTAACCATGCGAAGACAAGACCTTCGC 1472 Query 196 ATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAGGCCATGCGATT 255 ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| Sbjct 1471 ATCGAAAGTTGATAGGGAAGAAATTTGAATGAACCATCGCCGGCGCAAGGCCATGCGATT 1412 Query 256 CGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTTTTTTATCTAATAAA 315 || ||||||| |||||||||| || | |||||| ||| ||||||||| |||||||||| Sbjct 1411 CGAGAAGTTATCATGAATCACC-AGAAAGCCCGAA-GGCATTGGTTTTTAATCTAATAAA 1354 Query 316 TACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTAT 375 |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 1353 TACATCCCTTCCGAAGTCGGGATTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTAT 1294 Query 376 CCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTC 435 ||| |||||||||| |||||||||||||||||||| || ||||||||||||||||||||| Sbjct 1293 CCAAGTAGTAAGGTGCTATCAAATAAACGATAACTTATATAATGAGCCATTCGCAGTTTC 1234 Query 436 ACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGAC 495 ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1233 GCTGTATA-ATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGAC 1175 Query 496 TACTGGCAG 504 ||||||||| Sbjct 1174 TACTGGCAG 1166 Score = 174 bits (192), Expect = 5e-41 Identities = 101/104 (97%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||| ||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct 1750 GTACTCATTCCGATTACAAGACCCATAAGGGCCCTGTATCAGTATTTATTGTCACTACCT 1691 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTT 104 |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1690 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTT 1647 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510394487040