Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Huntiella_20moniliformis_20[genbank_20GCA_5F000712465.1_202014-06-
26] 365 sequences; 25,429,610 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq321 574 1e-161
>seq321
Length=1841
Score = 574 bits (636), Expect = 1e-161
Identities = 387/429 (90%), Gaps = 3/429 (1%)
Strand=Plus/Minus
Query 76 GGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCT 135
||||||||||||||||||||||||||||| | ||||||||| |||||||||||||||||
Sbjct 1591 GGGTAATTTGCGCGCCTGCTGCCTTCCTTAAAAGTGGTAGCCATTTCTCAGGCTCCCTCT 1532
Query 136 CCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACC 195
|||| |||| |||||| | ||||||||||||| |||||| | | || | | | |
Sbjct 1531 CCGGGGTCGAGCCCTAACCCTCCGTTACCCGTTGTAACCATGCGAAGACAAGACCTTCGC 1472
Query 196 ATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAGGCCATGCGATT 255
||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||
Sbjct 1471 ATCGAAAGTTGATAGGGAAGAAATTTGAATGAACCATCGCCGGCGCAAGGCCATGCGATT 1412
Query 256 CGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTTTTTTATCTAATAAA 315
|| ||||||| |||||||||| || | |||||| ||| ||||||||| ||||||||||
Sbjct 1411 CGAGAAGTTATCATGAATCACC-AGAAAGCCCGAA-GGCATTGGTTTTTAATCTAATAAA 1354
Query 316 TACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTAT 375
|||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1353 TACATCCCTTCCGAAGTCGGGATTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTAT 1294
Query 376 CCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTC 435
||| |||||||||| |||||||||||||||||||| || |||||||||||||||||||||
Sbjct 1293 CCAAGTAGTAAGGTGCTATCAAATAAACGATAACTTATATAATGAGCCATTCGCAGTTTC 1234
Query 436 ACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGAC 495
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1233 GCTGTATA-ATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGAC 1175
Query 496 TACTGGCAG 504
|||||||||
Sbjct 1174 TACTGGCAG 1166
Score = 174 bits (192), Expect = 5e-41
Identities = 101/104 (97%), Gaps = 0/104 (0%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||
Sbjct 1750 GTACTCATTCCGATTACAAGACCCATAAGGGCCCTGTATCAGTATTTATTGTCACTACCT 1691
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTT 104
||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1690 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTT 1647
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510394487040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |