Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Huntiella_20moniliformis_20[genbank_20GCA_5F000712465.1_202014-06- 26] 365 sequences; 25,429,610 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq59 266 3e-66 >seq59 Length=151500 Score = 266 bits (294), Expect = 3e-66 Identities = 1208/1884 (64%), Gaps = 62/1884 (3%) Strand=Plus/Plus Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137 || || ||||||||||| | | |||||| || | ||| | || |||||||| || ||| Sbjct 85935 TCAACAGTGAACTGGATAGGAGCAGCAGCAGCTTGGGTACGCAGGTAGTACATACCCGTC 85994 Query 65138 TTGAGGCC-AGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAAT-TCGGCT 65195 ||||| || ||| |||| | ||| ||||| | || | || || | | | || | Sbjct 85995 TTGAGACCGAGCTT-CCAACCGGCGAAGTGCAT-GCTGGTGATCTTACCCATGGTAGGGT 86052 Query 65196 CGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCA 65255 | || || || |||||||||||| |||||| || | ||||||||| || |||| Sbjct 86053 CCTTCATGTGAATGTTCAACGACTGAGACTGATCAATAAAGGCACCACGATCGGCCGCCA 86112 Query 65256 TGTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGT-ACCTCA 65314 | | || | | || || |||||||| || ||||||||||| ||| | | ||| Sbjct 86113 TTTGAACAACAGTGCGCTGAGAAATCTCCCAAACCGTCTTGTACAGA-GACTTGATGTCA 86171 Query 65315 ATTGGAATCTCCTCAATGTCCTGGACTGAACCAC-GACGTGCAATAATGCGATTACGCAT 65373 ||||| |||| ||||| ||||| | || | ||| || || || ||| Sbjct 86172 GCAGGAATGCTGGGGATGTTCTGGATAGAACCGTTGTCG-GAAATGATACGGTTCTTCAT 86230 Query 65374 CGACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACTTG 65433 || ||||||| ||| | || | || | ||| ||| | |||| || || Sbjct 86231 GTTGTCGGACCACAGACCAAGGTCAACCAGGTCACGAAGCAACCACGGGTTGACAACCTG 86290 Query 65434 GAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATTC 65493 |||||| || | || ||||| || || |||||||| ||| || || ||| | || Sbjct 86291 GAACTCACCAGCCAACACACGGCGCTGGTAAATGTTGGAAGTGTAAGGCTCGAAGCACTC 86350 Query 65494 AGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTT 65553 |||| || ||||| |||| || || || || ||||| || || | | | ||||| Sbjct 86351 GTTGTTACCCAGAATCTGGGACGTCGAGGCTGTGGGCATAGGGGCCAAAAGAAGGGAGTT 86410 Query 65554 TCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACATCGGTTTATC 65613 || | |||| | | || | || ||| || ||||| ||||| ||| | Sbjct 86411 GCGAACACCGTGCTGCTTGATCTGGTCCTTCAAAGAGTTCCAGTCCCACA--GGTCACTG 86468 Query 65614 GTCG--ACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAACCG 65671 | | |||||| ||||| || || ||| | || | | | || ||||| Sbjct 86469 GGGGTAACATCC------CACATGTCGAACTGAAGGATACCCTGAGAGACAGGAGAACCC 86522 Query 65672 AGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGCGGCA 65731 | | | ||| || || | |||| | || | |||||| || || Sbjct 86523 TCGTAGGTCGAGTAGGGACCTTCAAGAATAGCAATATCGCACGACGCCTCGAGGGCAGCG 86582 Query 65732 AAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTACGGC 65791 ||||||||||| || || | || || | ||| |||||| | ||| | ||| Sbjct 86583 TGGTAAATGGTCTCAAAGATCTGCTTGTTGAGCTGACGGGCCTCAGCAGACTCAAAAGGC 86642 Query 65792 ATACCCATCAGGACA--AAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGAT 65849 || | | || || || | || |||||||| ||||| |||| ||||||||| || | Sbjct 86643 ATGCGAAG--GGCCAGGAAGGCATCAGCCAGACCCTGAACACCAACACCGATGGGGCGGT 86700 Query 65850 GACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGAT 65909 | |||| ||| | ||||| || ||||||| || | ||| |||||||| | Sbjct 86701 GGCGCATGTTGCTGTTACGGGCCTCGATAACGGGGTAGTGGTTCACATCAATAATGCGGT 86760 Query 65910 TCAAATTGCGTGTCACCACATGCACGATA-CGTCGCAATTGTTCGAAATCAAAATGTTTA 65968 |||| ||||| || || | || | ||| ||| | | ||| || || Sbjct 86761 TCAAGTTGCGAACAACGACCTTGGTGACATCGT-GCAGCTTCTGGAAGTCG-------TA 86812 Query 65969 GGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAG 66028 ||| | | || | | | ||||| ||||| |||||||| || |||||||| Sbjct 86813 GGAG--TTGT---TGTTGTAGTCAACAAAGGCAGGAAGAGCAAGAGAAGCCAGGTTGCAC 86867 Query 66029 ACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGT 66088 || || | ||| || |||||| ||||||| || || ||||| || || | ||| Sbjct 86868 ACGGCAACCTCATCGGGAGCGCAGTACTCGATGATCTCAGTGCAAAGGTTGGAACTGCGA 86927 Query 66089 ATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTAC 66148 || || |||| |||| || ||||||||||| ||||| ||||||||||| |||| | Sbjct 86928 ATAGTTCCCAGGTTCTTCTGGTTACTCTTGCGGTTGCAGTGATCCTTGTACAGCATGAAA 86987 Query 66149 GGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACC 66208 || | || |||||| || | ||| | ||| || | ||| || | ||||| | Sbjct 86988 GGGTTACCAGTCTCAGTCTGAGCCTCCAAGATAGCATACCACAGCTTCTGGGCCTTAATG 87047 Query 66209 GTACGTACCGCC-CTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACC 66267 || | || ||| | || | ||||||| | ||||| || || |||| | Sbjct 87048 GTCAG-ACGGCCACGTCCCTCCTGTTCGTACTTGGTATAGAGAGCCTCAAA---TTCATC 87103 Query 66268 -CCATACT--TCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATC 66324 ||||| || | ||| | || |||| || || ||||| || | ||| | || | Sbjct 87104 GCCATAGCAGTCAGCCAGGCCAGGGCACTCGTTGGGGCACATGAGAGTCCAGTTGCCGTT 87163 Query 66325 CTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGC 66384 || || ||||| ||| || | |||||| ||||| | ||| ||| | |||||| || Sbjct 87164 CTTCTCAACACGCTTCATGAACAAATCAGGAATCCACAAGGCAAGGAACAAATCGCGAGC 87223 Query 66385 TCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATG 66444 || |||||| | ||||| || || || | || |||||||| || | || || || Sbjct 87224 ACGAATCTCCTCCTTACCGTGGTTCTTCCGGAGATCAAGGAACTCGAACACATCAGCGTG 87283 Query 66445 CCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTA 66504 ||| || |||||||| ||||| || | || ||| ||| ||||| || |||||||| Sbjct 87284 CCACGGCTCCAGGTAAATGGCAAAAGCACCGGGACGCTTGTTACCACCCTGATCGACGTA 87343 Query 66505 GCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGT 66564 ||||| ||||||||||||||||||||| || || | ||||| || | || ||||| Sbjct 87344 ACGAGCAGTATTGTTGAAGACACGCAACATGGGAACAATACCGTTCGAGGTACCGTTGGT 87403 Query 66565 GCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGC 66624 ||| | ||| || || || || ||| ||| || || |||||||| ||||| || Sbjct 87404 GCCAGCAATGTAAGAACCAGTAGCACGGATACGGTGTACGTTGAGACCAATGCCACCCGC 87463 Query 66625 CGTCTTCGAGATGGCAGCACAA-TC-GGCCACTGTCCGGAATATGCCGTCAATGGAGTCA 66682 | |||| ||||| ||| ||| || | |||| | || || || || ||| Sbjct 87464 CATCTTGGAGATCATAGCGCAAGTCTTGAGGGTGTC--ATAGATACCTTCGATACTGTCC 87521 Query 66683 CCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAG 66742 |||| ||| | | | |||| ||| ||| ||||| | ||| || | || |||| Sbjct 87522 TCCTTCATGTCTACCAAGAAGCAAGAAGAAAGCTGGGGCTGGGGAGTACCAGCGTTGAAG 87581 Query 66743 AGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACA 66802 ||||| || | || || || ||| | | || |||||| ||||| || || | ||| Sbjct 87582 AGGGTAGGAGATGCATGAGTGAAGAACTTGCTCGACATGAGGTTGTAAGTTTCCAGAACA 87641 Query 66803 GCATCAATGTTTTCGCCATGAATCCCGAGTGC-ACATCGCATCAGGAGGTATTGAGGCCG 66861 |||| || || || || |||| || ||| ||||| | | || ||||| || Sbjct 87642 CGCTCAACATTGTCACCCCAGATACCGACAGCTACA-CGCATAATCATGTGCTGAGGACG 87700 Query 66862 TTCGACCA----GCCG--ATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGAT 66915 || || | |||| | ||||| | | ||||| | ||||| |||||||| Sbjct 87701 CTCAACAATCTTGCCGTCAAGCTTGAGA------AGATAGGATCTTTCCAAGGTCTTGAA 87754 Query 66916 ACCAAAGTACGAGTAATTGAAATC 66939 |||||||||| ||| ||||| || Sbjct 87755 ACCAAAGTACTGGTAGTTGAAGTC 87778 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397566231443600