Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Huntiella_20omanensis_20[genbank_20GCA_5F000833645.1_202015-02-09]
6,542 sequences; 31,125,221 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq5785 630 3e-178
>seq5785
Length=8032
Score = 630 bits (698), Expect = 3e-178
Identities = 542/662 (82%), Gaps = 20/662 (3%)
Strand=Plus/Minus
Query 28 AGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTT 87
||||||||||||||||||||| |||||||||||| ||||||||||||||||| || ||||
Sbjct 1315 AGCTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATGGGAGGTATATCTCTT 1256
Query 88 CTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAA 147
|||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1255 CTAAAGCTAAATATAGGCTAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAA 1196
Query 148 AGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAAC 207
||||||||| ||||||||||||| ||||||||||||||||||||||||||||| | ||
Sbjct 1195 AGCACTTTGAAAAGAGAGTTAAACAGCACGTGAAATTGTTGAAAGGGAAGCGCCTATGAC 1136
Query 208 CAGACTTG---CCCGCAGTTGCTCAACCGGCCCCTCGGCCGG-TGCACTCTTCTGCGGTC 263
|||||||| | ||||| | |||| | | | ||||| | | |
Sbjct 1135 CAGACTTGTTTCTATCAGTTTTGGTAGTTT----TCGGACTGCTTTACTCTGTTA-GTAC 1081
Query 264 AGGCCAGCATCAGCTCG--GGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGG 321
|||||| |||||| | | | ||| ||| ||||| ||||||||||| || || ||
Sbjct 1080 AGGCCAACATCAGTTTGTTGTCGG--GGAGAAAGGTTTAGGGAATGTGGCTCC--TCCGG 1025
Query 322 GGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTAG 381
| |||||||||||| ||| | || | |||||||| ||||||| |||| ||
Sbjct 1024 GAGTGTTATAGCCCTTTACATAATACCCTTCGGC-AGACTGAGGACCGCGCTTCGGCAAG 966
Query 382 GATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACAT 441
|||| |||||||||||| | |||| ||||||||| |||||||||||||||||| | | |
Sbjct 965 GATGTTGGCGTAATGGTCATCAGCGACCCGTCTTGAAACACGGACCAAGGAGTCAACCTT 906
Query 442 CTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAAC 501
||||||||||||||||||| |||||| |||||||||||| ||||||| ||||| ||
Sbjct 905 ATATGCGAGTGTTTGGGTGTTAAACCCCAGCGCGTAATGAACGTGAACGTAGGTGAGA-- 848
Query 502 CCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATA 561
| || ||| ||||||||||| ||||||| |||||||||||||||||||||||||
Sbjct 847 --GCTTCGGCGCATCATCGACCGATTCTGATGTTCTCGGATGGATTTGAGTAAGAGCATA 790
Query 562 GCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTC 621
| | |||||||||||| |||||||||||| || ||||||||||||||||||||||||
Sbjct 789 TAGGGTTGGACCCGAAAGAAGGTGAACTATGCTTGTATAGGGTGAAGCCAGAGGAAACTC 730
Query 622 TGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGC 681
|||||||||||||||||||||||| ||||||||||||||||||||| || | || |||||
Sbjct 729 TGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATATGAGCATGGGGGC 670
Query 682 GA 683
||
Sbjct 669 GA 668
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079859674100
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |