Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Huntiella_20omanensis_20[genbank_20GCA_5F000833645.1_202015-02-09]
6,542 sequences; 31,125,221 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq6498 269 2e-67
seq6529 185 7e-42
>seq6498
Length=96284
Score = 269 bits (298), Expect = 2e-67
Identities = 643/967 (66%), Gaps = 20/967 (2%)
Strand=Plus/Plus
Query 66002 GGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACA 66061
|| || ||||| ||||| | |||||| ||||| | ||| ||||||||| ||||||| |
Sbjct 27666 GGGAGAGCAAGCGATGCCAAGTTGCACACAGCGACCTCATCAGGAGCGCAGTACTCGATA 27725
Query 66062 ATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGA 66121
|| || ||||| || || | ||| || || |||| |||| ||| |||||||||||
Sbjct 27726 ATCTCAGTGCAAAGGTTGGAACTGCGAATAGTTCCCAGGTTCTTTTGGTTACTCTTGCGG 27785
Query 66122 TTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATG 66181
||||| ||||||||||| |||| | || | || ||||| || | || | |||
Sbjct 27786 TTGCAGTGATCCTTGTACAACATGAAAGGGTTACCAGTCTCCGTCTGAGCTTCCAGAATG 27845
Query 66182 GCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCC-CTACCTTTGCGTTCGTAATG 66240
|| | ||| || | ||||| | ||| | || ||| | |||| | ||||| |
Sbjct 27846 GCATACCACAGCTTCTGAGCCTTGATGGTAAG-ACGGCCACGTCCTTCCTGCTCGTACTT 27904
Query 66241 TTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGG 66300
|||| || ||||| ||||| | || | || | || |||| || ||
Sbjct 27905 GACGTAAAGAGCCTCGAATTCCTCACCGTAGCAATCAGCCAAGCCAGGGCACTCGTTGGG 27964
Query 66301 ACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCA 66360
||||| || | ||| || || | || || ||||| ||| || | ||||| |||||
Sbjct 27965 GCACATGAGGGTCCATTCGCCGTTCTTCTCAACACGCTTCATGAACAAGTCAGGGATCCA 28024
Query 66361 GAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTC 66420
||||| ||| | |||||| || || |||||| | ||||| || || || | |||
Sbjct 28025 CAGGGCAAGGAACAAATCGCGAGCGCGAATCTCCTCCTTACCGTGGTTCTTCCGAAGGTC 28084
Query 66421 GAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACG 66480
||||||||||| | || || ||||| || |||||||| ||||| || | || |||
Sbjct 28085 AAGGAACTCAAACACATCAGCGTGCCACGGCTCCAGGTAAATGGCAAAAGCACCAGGACG 28144
Query 66481 TTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTAC 66540
||| |||||| || |||||||| || || |||||||| ||||||| ||| || ||
Sbjct 28145 CTTGTTGCCACCCTGATCGACGTAACGGGCAGTGTTGTTGAACACACGCAGCATAGGAAC 28204
Query 66541 GAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTG 66600
| ||||| || | || || |||||| | ||| ||| || || || ||| |||
Sbjct 28205 AATACCGTTCGAGGTACCGTTAGTGCCGGCAATGTAGGAACCAGTAGCACGGATACGGTG 28264
Query 66601 AACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGCC---ACTGT 66657
||| || ||||| |||||||| ||| |||| ||||| |||||| || | | ||
Sbjct 28265 AACGTTGAGACCGATACCACCCGCCATCTTGGAGATCATAGCACA---GGTCTTGAGGGT 28321
Query 66658 CCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTG 66717
| || || || || ||| |||| ||| | | | |||| ||| ||| ||
Sbjct 28322 ATCATAGATACCTTCGATACTGTCCTCCTTCATGTCTACCAAGAAGCAGGAAGAAAGCTG 28381
Query 66718 GGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGA 66777
|| | || || |||| ||||||||| || | ||||| || ||| | | || ||
Sbjct 28382 AGGCTGAGGGGTACCGGCGTTGAAGAGGGTAGGAGAGGCGTGAGTGAAGAACTTGCTCGA 28441
Query 66778 CATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGCACA 66837
|||| ||||| || || | ||| |||| || || || || |||| |||
Sbjct 28442 CATGAGGTTGTAAGTTTCCAGAACACGCTCAACATTATCACCCCAGATACCGACAGCAAC 28501
Query 66838 TCGCATCAGGAGGTATTGAGGCCGTTCGACCAGC---CGATC---CTTGATATGCATTAA 66891
||||| | | || ||||| || ||||| | | | ||| ||||| | |
Sbjct 28502 ACGCATAATCATGTGCTGAGGACGCTCGACAATCTTGCCATCAAGCTTGAGA------AG 28555
Query 66892 GTAGGAGCGTTCCAGGGTCTTGATACCAAAGTACGAGTAATTGAAATCGTTAGCATGCAC 66951
||| || | |||||||||||| | ||||||||| ||| ||||| || ||| ||
Sbjct 28556 GTAAGATCTTTCCAGGGTCTTAAATCCAAAGTACTGGTAGTTGAAGTCACGGTCATAGAC 28615
Query 66952 GATGGCC 66958
|||||||
Sbjct 28616 GATGGCC 28622
Score = 129 bits (142), Expect = 5e-25
Identities = 330/494 (67%), Gaps = 10/494 (2%)
Strand=Plus/Plus
Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137
|| || ||||||||||| | | |||||| |||| ||| | || |||||||| || |||
Sbjct 26760 TCAACAGTGAACTGGATAGGAGCAGCAGCGGCCTGGGTACGCAGGTAGTACATACCCGTC 26819
Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTG--CATAATTCGGCT 65195
||||| ||| |||| | || ||||| | || |||| ||| ||| || || |
Sbjct 26820 TTGAGACCAAGCTTCCAACCCGCAAAGTGCAT-GCTGGTAATCTTGCCCATGGTT-GGGT 26877
Query 65196 CGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCA 65255
| || || || |||||||||||| |||||| || | |||||| || |||||||
Sbjct 26878 CCTTCATGTGAATGTTCAACGACTGAGACTGATCAATAAAGGCACCACGGTCGGCAGCCA 26937
Query 65256 TGTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGT-ACCTCA 65314
| | || | | ||| || |||||||| || |||||||| | | ||| | | ||
Sbjct 26938 TCTGAACAACAGTACGCTGAGAAATCTCCCAAACAGTCTTGTA-AAGAGACTTGATGTCC 26996
Query 65315 ATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGT--GCAATAATGCGATTACGCA 65372
||||| |||| ||||| |||| || || | ||| ||||| || ||
Sbjct 26997 GCCGGAATGCTGGGGATGTTCTGGATAGAAC--CGTTGTCCGAAATGATGCGGTTCTTCA 27054
Query 65373 TCGACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACTT 65432
| || ||||||| ||| | || | ||||| ||| ||| | | |||| || |
Sbjct 27055 TGTTGTCCGACCACAGACCAAGGTCAACAAGATCGCGAAGCAACCAAGGGTTGACAACCT 27114
Query 65433 GGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATT 65492
||||||| || | || ||||| || || ||||| || ||| || || ||| | |
Sbjct 27115 GGAACTCACCAGCCAACACACGGCGCTGGTAAATGTTCGAAGTGTAAGGCTCGAAGCACT 27174
Query 65493 CAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGT 65552
| |||| || ||||| || | ||| || ||||| |||||||| || | | || ||||
Sbjct 27175 CGTTGTTACCCAGAATCTGAGAAGTTGACGCAGTGGGCATGGGCGCCAGAAGCAGCGAGT 27234
Query 65553 TTCGCAATCCGTTC 65566
| || | ||||||
Sbjct 27235 TGCGAACACCGTTC 27248
>seq6529
Length=132804
Score = 185 bits (204), Expect = 7e-42
Identities = 594/915 (65%), Gaps = 20/915 (2%)
Strand=Plus/Minus
Query 61027 GAACCCCTATTGCAAGAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGAT 61086
|||||||| | || || || || |||||||| | ||||| ||| |||| | ||
Sbjct 77921 GAACCCCTCCTTCAGGAAAACCCCAACCGTTTCGTGCTCTTCCCTATCAAGTACCACGAG 77862
Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146
|| |||| |||||||| ||||| || || || |||||||| | |||||| | || |
Sbjct 77861 ATCTGGCAAATGTACAAGAAGGCCGAGGCCTCTTTCTGGACCGCCGAGGAGATTGACCTT 77802
Query 61147 TCCAAAGACATGAATGACTGGGAG---CGTTTATCGAGCGGTGAACAACATTTCATTAAA 61203
||||| || | | |||||| | || | | | | ||| || |||||
Sbjct 77801 TCCAAGGATCTTCACGACTGGAACAACCGCATGACAAAGGATGAGCAGTTCTTCATCTCT 77742
Query 61204 CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGT 61263
|| || | || ||||| |||||||| |||||||| ||||| ||||| || | || |||
Sbjct 77741 CACGTTCTTGCCTTCTTCGCCGCTTCTGACGGTATTGTCAACGAGAACTTGGTCGAGCGT 77682
Query 61264 TTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATG 61323
||| | ||||| || | | || || ||||| |||||||| |||||||| |||
Sbjct 77681 TTCTCTGCTGAGGTCCAGATCCCCGAAGCCCGTTGCTTCTACGGTTTCCAGATCATGATG 77622
Query 61324 GAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCG 61383
||||| |||||||||||| ||| | | || || || || ||||||| ||||| ||
Sbjct 77621 GAGAACATCCACTCGGAGACCTACTCTTTGCTGATTGACACCTACATCAAGGAGCCTGCT 77562
Query 61384 GAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGAT 61443
| || | | ||||| ||||| || || || || | || || || ||
Sbjct 77561 CAGCGCACATACCTCTTCAACGCCATTGACACTATTCCCTGCATTCGCCGCAAGGCCGAC 77502
Query 61444 TGGGCCTTCAATTGGATCACCAGTACAA--CGGCTACATTTGGTGAACGATTGCTGGCAT 61501
|||||| | || ||||| | |||| | | || |||| | || || | || |
Sbjct 77501 TGGGCCCTGAAGTGGATTGC--TGACAAGGAGTCGACTTTTGCCCAGCGTCTGGTTGCCT 77444
Query 61502 TTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGA 61561
|||| | || |||||| | || ||| ||| | |||||| | ||||| ||| || |
Sbjct 77443 TTGCCGCTGTTGAGGGTATCTTCTTCTCTGGTGCTTTTGCCTCTATCTTCTGGCTGCGCA 77384
Query 61562 AACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCA 61621
| ||||| | |||||||||||||| ||| ||| ||| | || || || || |||||
Sbjct 77383 AGCGTGGTATGATGCCCGGTCTGACTTTCTCCAACGAGCTTATCTCTCGTGATGAGGGTC 77324
Query 61622 TGCATTGTGATTTTG-CTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAG 61680
| || || |||| ||| || || || || || |||| | ||| | ||
Sbjct 77323 TTCACACGGACTTTGCCTGCCTT-CTTTT------CTCTCACCTGAA-CAACCGCCCCAG 77272
Query 61681 GAGCGTGTGGGT----GAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGAC 61736
| || | | || || | ||| || || || || |||| || || ||
Sbjct 77271 CAAGCAGTTGATCCAGGACATCATCACTGATGCCGTCGTCATTGAGAAGGAGTTCCTTAC 77212
Query 61737 TGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGA 61796
|| ||| | ||| | | || |||| ||||| || || ||| | ||||| ||
Sbjct 77211 CGAGGCTCTTCCCTGCGCTCTTCTCGGTATGAACGCTGACCTCATGAAGACCTATATCGA 77152
Query 61797 ATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAA 61856
|| || ||||||||||| |||||| | | |||| | | | || || | ||
Sbjct 77151 GTTCGTCGCCGACCGTCTTCTGGTCGCTCTCGGTAACGACAAGGTGTACAAGGCCTCCAA 77092
Query 61857 CCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACG 61916
||| || || || ||||| | || || || | ||| ||||| || || |||||||| ||
Sbjct 77091 CCCCTTCGACTTTATGGAGAACATCTCCCTTGGTGGAAAGACCAACTTCTTCGAGAAGCG 77032
Query 61917 TGTAGGCGACTATCA 61931
||| || || || ||
Sbjct 77031 TGTTGGTGATTACCA 77017
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397536301654880
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