Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Huntiella_20savannae_20[genbank_20GCA_5F001483325.1_202015-12-30]
361 sequences; 28,542,441 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq10 376 5e-102
>seq10
Length=389957
Score = 376 bits (416), Expect = 5e-102
Identities = 273/314 (87%), Gaps = 3/314 (1%)
Strand=Plus/Plus
Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64
||||||||||| |||||| ||| ||| || ||||| |||| | ||||| |||||
Sbjct 2884 TGGTCCGGCCGAATCTTTCCCTCTATGGAACCTCATGCTCTTCG--GAGTGTGTTGGGGA 2941
Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124
||||||||||||||||||||||||||||| || | |||||||| ||||||||||
Sbjct 2942 AATAGGACTTTTACTTTGAAAAAATTAGAGTGCTCCAGGCAGGCCTATGCTCGAATAGTA 3001
Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 184
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 3002 CAGCATGGAATAATAGAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 3061
Query 185 AATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 244
||||||||||||||| ||||||||| |||||||||| |||||||||||||||||||||
Sbjct 3062 AATGATTAATAGGGACAGTCGGGGGCATCAGTATTCAGCTGTCAGAGGTGAAATTCTTGG 3121
Query 245 ATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGA 304
|| | ||||||||||||||||||||||| || ||||||||||||||||| || || ||
Sbjct 3122 ATCTGCTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTGATAAG-GA 3180
Query 305 ACGAAAGTTAGGGG 318
||||||||||||||
Sbjct 3181 ACGAAAGTTAGGGG 3194
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915196696128
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |