Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20fraxineus_20[genbank_20GCA_5F001414365.1_202015-10-
27] 4,749 sequences; 51,524,987 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq163 922 0.0
>seq163
Length=14151
Score = 922 bits (1022), Expect = 0.0
Identities = 605/665 (91%), Gaps = 2/665 (0%)
Strand=Plus/Plus
Query 20 CCGTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTA 79
|||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 12695 CCGTGTAAAGCTTTTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTA 12754
Query 80 AATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAA 139
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 12755 TATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAA 12814
Query 140 AGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199
||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||
Sbjct 12815 AGATGAAAAGCACTTTGGAAAGAGAGTTAAACAGTACGTGAAATTGTTGAAAGGGAAGCG 12874
Query 200 CTTGCAACCAGACTTGCCCGCAGTTGCTCAACC-GGCCCCTCGGCCGGTGCACTCTTCTG 258
|||||||||||||||||| || || | ||| || || ||| | ||||||||| |
Sbjct 12875 CTTGCAACCAGACTTGCCTGCGGTCGATCATCCTGGGTTCTCC-CTGGTGCACTCGATCG 12933
Query 259 CGGTCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTC 318
||||||||||||||| | | || ||| ||||||||||| |||||||| || ||||
Sbjct 12934 TGGTCAGGCCAGCATCGGTTTCGGTGGTGGGATAAAGGCCTTGGGAATGTAGCAGTCTTC 12993
Query 319 GGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGC 378
||| |||||||||||| |||| ||||| ||| || |||| |||| ||||||| ||||
Sbjct 12994 GGGCTGTGTTATAGCCCTCGGTGCAATGCCGCCTACCGGGACCGAGGACCGCGCTTCGGC 13053
Query 379 TAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAA 438
|||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||
Sbjct 13054 TAGGATGCTGGCGTAATGGTTGTAAGCGACCCGTCTTGAAACACGGACCAAGGAGTCTAA 13113
Query 439 CATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGG 498
||||||||||||||||||||||| |||||| | |||||||| || ||||||||||||| |
Sbjct 13114 CATCTATGCGAGTGTTTGGGTGTTAAACCCATACGCGTAATTAACGTGAACGGAGGTGAG 13173
Query 499 AACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGC 558
||||| | |||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 13174 AACCCTTAAGGGTGCATCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGC 13233
Query 559 ATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAA 618
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 13234 ATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTAAATAGGGTGAAGCCAGAGGAAA 13293
Query 619 CTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGG 678
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 13294 CTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGGGTATAGG 13353
Query 679 GGCGA 683
|||||
Sbjct 13354 GGCGA 13358
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079898133950
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |