Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20fraxineus_20[genbank_20GCA_5F001414365.1_202015-10- 27] 4,749 sequences; 51,524,987 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq163 922 0.0 >seq163 Length=14151 Score = 922 bits (1022), Expect = 0.0 Identities = 605/665 (91%), Gaps = 2/665 (0%) Strand=Plus/Plus Query 20 CCGTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTA 79 |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 12695 CCGTGTAAAGCTTTTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTA 12754 Query 80 AATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAA 139 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 12755 TATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAA 12814 Query 140 AGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 ||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| Sbjct 12815 AGATGAAAAGCACTTTGGAAAGAGAGTTAAACAGTACGTGAAATTGTTGAAAGGGAAGCG 12874 Query 200 CTTGCAACCAGACTTGCCCGCAGTTGCTCAACC-GGCCCCTCGGCCGGTGCACTCTTCTG 258 |||||||||||||||||| || || | ||| || || ||| | ||||||||| | Sbjct 12875 CTTGCAACCAGACTTGCCTGCGGTCGATCATCCTGGGTTCTCC-CTGGTGCACTCGATCG 12933 Query 259 CGGTCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTC 318 ||||||||||||||| | | || ||| ||||||||||| |||||||| || |||| Sbjct 12934 TGGTCAGGCCAGCATCGGTTTCGGTGGTGGGATAAAGGCCTTGGGAATGTAGCAGTCTTC 12993 Query 319 GGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGC 378 ||| |||||||||||| |||| ||||| ||| || |||| |||| ||||||| |||| Sbjct 12994 GGGCTGTGTTATAGCCCTCGGTGCAATGCCGCCTACCGGGACCGAGGACCGCGCTTCGGC 13053 Query 379 TAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAA 438 |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| Sbjct 13054 TAGGATGCTGGCGTAATGGTTGTAAGCGACCCGTCTTGAAACACGGACCAAGGAGTCTAA 13113 Query 439 CATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGG 498 ||||||||||||||||||||||| |||||| | |||||||| || ||||||||||||| | Sbjct 13114 CATCTATGCGAGTGTTTGGGTGTTAAACCCATACGCGTAATTAACGTGAACGGAGGTGAG 13173 Query 499 AACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGC 558 ||||| | |||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 13174 AACCCTTAAGGGTGCATCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGC 13233 Query 559 ATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAA 618 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 13234 ATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTAAATAGGGTGAAGCCAGAGGAAA 13293 Query 619 CTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGG 678 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 13294 CTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGGGTATAGG 13353 Query 679 GGCGA 683 ||||| Sbjct 13354 GGCGA 13358 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079898133950