Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20fraxineus_20[genbank_20GCA_5F001414365.1_202015-10-
27] 4,749 sequences; 51,524,987 total letters
Query= AAMG01001634.1
Length=217
Score E
Sequences producing significant alignments: (Bits) Value
seq163 163 3e-38
>seq163
Length=14151
Score = 163 bits (180), Expect = 3e-38
Identities = 155/193 (80%), Gaps = 4/193 (2%)
Strand=Plus/Minus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
||||||||||||||||||| | ||||||||||| |||||||||||||||||||||||
Sbjct 9667 CTAGAAACCAACAAAATAGAACCACACGTCCTATTTCATTATTCCATGCTAATGTATTCG 9608
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125
|| || |||||||||||||||||||||||| |||| ||||||||||| ||||| | ||
Sbjct 9607 AGCATAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTAGTTCCCCGACA 9548
Query 126 CA-CCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGT-AATGCAGTACTCGC 182
|| ||| |||| ||||| | || || | | ||| | | | ||| |||| | |||
Sbjct 9547 CACCCAGTGAAGGGCATGC-GGTTCCCTAGAAGGAAAGACCCGGTCGGACCAGTGCACGC 9489
Query 183 CGTGAGGCGGACC 195
||||||||||||
Sbjct 9488 GGTGAGGCGGACC 9476
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595172617266
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |