Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20fraxineus_20[genbank_20GCA_5F001414365.1_202015-10-
27] 4,749 sequences; 51,524,987 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq4538 264 9e-66
seq678 114 1e-20
>seq4538
Length=19519
Score = 264 bits (292), Expect = 9e-66
Identities = 749/1138 (66%), Gaps = 22/1138 (2%)
Strand=Plus/Minus
Query 65807 AAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGACGCAAATTGGAACGT 65866
|||| || || ||||||||||| |||| | | || || | ||||| |||||| |
Sbjct 7813 AAAGCATCAGCAAGACCTTGAACACCAAGAGCAATTGGTCTGTGACGGAAATTGCTCTTT 7754
Query 65867 CTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGATTCAAATTGCGTGTCACC 65926
|| || || || || |||||||| |||||||| ||||| |||||| || | || || |
Sbjct 7753 CTTGCTTCTGGAACTGGGTAGTAGTTGATATCAATAATCTTATTCAAGTT-CTTGACAAC 7695
Query 65927 ACATGCACGATACGTCGCAATTGTTC--GAAATCAAAATGTTTAGGACGATCGGGAGTGC 65984
| | | | || ||| | ||| ||| ||| || || | || || | |
Sbjct 7694 AACTTGGC-AGACCTCGTGAAGCTTCTGGAAGTCATAA-GT----GGCGGTCTT---TTC 7644
Query 65985 CGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAG 66044
| ||| | | ||||| ||||| ||||| | ||||| || || | || || |
Sbjct 7643 ATCA----ACATATGTTGGAAGAGCAAGTGATGCCAAATTGCAAACGGCGACTTCATCTG 7588
Query 66045 GAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCT 66104
| || ||||| ||||| || |||||||| || || || ||||| || | ||||
Sbjct 7587 GTGCACAGTACTCAACAATCTCCGTGCACAGGTTGGAGCTTCGGATGGTACCAAGGTTCT 7528
Query 66105 GTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAA 66164
|| || ||||| || ||||| ||||||||||| | |||| | || | ||||||||
Sbjct 7527 TCTGGTTGCTCTTTCGGTTGCAGGCATCCTTGTAGAGCATGAAAGGGTTTCCGGTCTCGG 7468
Query 66165 CTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTAC 66224
|| | || | || | || |||||| | ||||| || || | ||| ||||
Sbjct 7467 TCTGAGCTTCGAGAATAGAGTACCAAAGCTTTTGAGCCTTGACAGT-CTTACGGCCCATG 7409
Query 66225 CTTTGCGT-TCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGA 66283
| | | ||||| | || || | || || ||||| | || || | || |
Sbjct 7408 TTCTCAGCCTCGTATTTCTCATACAAAGCCTCAAACTCATCACCGTAAACGTCAGCCAAA 7349
Query 66284 CATGGACACTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATA 66343
| ||||||| || || ||||||| | ||| ||| | || ||| ||||| |||
Sbjct 7348 CCAGGACACTCGTTAGGGCACATCAATGTCCAGTCAAGGTTCTTTTCAACACGCTTCATG 7289
Query 66344 AATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCG 66403
|||| ||| || ||||| || || ||||| ||||| || || || ||| || | |||
Sbjct 7288 AATAAATCTGGAATCCAAAGAGCATAGAAAAGATCACGGGCGCGGACCTCTTCCTTTCCG 7229
Query 66404 TGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATG 66463
|| || || || | ||| ||||||||||||| || || |||||||| || |||||||||
Sbjct 7228 TGGTTCTTTCGGAGGTCAAGGAACTCAAAGACATCAGCGTGCCATGGCTCAAGGTAGATG 7169
Query 66464 GCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAG 66523
|| || | || ||| ||| ||||| || || || || | ||| ||||||||
Sbjct 7168 GCAAAAGCACCAGGACGCTTGTTACCACCCTGATCAACATATCTGGCGGTGTTGTTGAAA 7109
Query 66524 ACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCT 66583
|| || | ||| || || | ||||| || || || || || || | ||| || |||
Sbjct 7108 ACTCGAAGCATAGGAACAATTCCGTTGGAGTTTCCGTTTGTACCAGCAATGTAGGCTCCA 7049
Query 66584 CGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCA 66643
|| || || ||| ||||| ||||| |||||||| || |||| || || |||
Sbjct 7048 GTGGCACGGATTCTGTGGACATTAAGACCGATACCACCAGCGTTCTTAGAAATCATAGCG 6989
Query 66644 CAA-TCGGC-CACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGT 66701
||| || | | |||| |||| || |||||| ||| |||| ||| | ||||
Sbjct 6988 CAAGTCTTCAAAGTGTCATAAATA--CCATCAATGCTGTCCTCCTTCATGTCGATGAGGA 6931
Query 66702 AGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCG 66761
| ||||| ||||| | || || || | || | || || || || | ||||| |
Sbjct 6930 AACATGATGAGAGTTGTGCTTGTGGAGTACCAGCAGCAAAAAGTGTTGGAGAGGCGTGGG 6871
Query 66762 TAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCAT 66821
||||||| | || ||||| | ||||| ||||| ||| |||| ||||| || || || |
Sbjct 6870 TAAAGTATTTGCTGGACATCAAGTTGTAGGTCTCAATGGCAGCCTCAATATTATCACCGT 6811
Query 66822 GAATCCCGAGTGCACATCGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGA 66881
|||| || | ||| ||||| | | | ||| || |||||| | | | | ||
Sbjct 6810 GAATACCAACAGCAACACGCATAATCATATGTTGTGGACGTTCGCAAATCTTGCCATCGA 6751
Query 66882 TATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAAAGTACGAGTAATTGAAATC 66939
| | | | || || || || |||||||||| || ||||| ||| ||||||||
Sbjct 6750 GACGGAGGAGATATGATCGCTCGAGGGTCTTGAATCCGAAGTATTGGTAGTTGAAATC 6693
>seq678
Length=9679
Score = 114 bits (126), Expect = 1e-20
Identities = 150/206 (73%), Gaps = 4/206 (2%)
Strand=Plus/Plus
Query 61434 GAAAGCGGATTGGGCCTTCAATTGGATCACCAGTACAACGG--CTACATTTGGTGAACGA 61491
||| || |||||||| | ||||||| ||| |||| | |||| |||| | ||||
Sbjct 7931 GAAGGCCGATTGGGCTGTTCGTTGGATC--CAGGACAAGGAGTCTACCTTTGCTCAACGT 7988
Query 61492 TTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTT 61551
| | || ||||| | || |||||| | || || ||||| || || || | ||||||
Sbjct 7989 CTTGTTGCCTTTGCTGCTGTTGAGGGTATCTTCTTTAGTGGCTCTTTCGCATCCATCTTT 8048
Query 61552 TGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGC 61611
||||||||||| ||||| |||||| | ||||| || ||| ||| |||||||| || ||
Sbjct 8049 TGGTTGAAGAAGCGTGGTCTTATGGCTGGTCTTACTTTCTCCAACGAGTTGATCTCCCGT 8108
Query 61612 GACGAGGGCATGCATTGTGATTTTGC 61637
|||||||| | || ||||||||
Sbjct 8109 GACGAGGGTCTCCACACCGATTTTGC 8134
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397544989385360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |