Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20fraxineus_20[genbank_20GCA_5F001414365.1_202015-10- 27] 4,749 sequences; 51,524,987 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq1536 86.0 2e-11 >seq1536 Length=41104 Score = 86.0 bits (94), Expect = 2e-11 Identities = 106/145 (73%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 364425 CAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCGT 364484 |||| ||||||||||| ||||||| | | || |||||||| | ||| || || ||||| | Sbjct 10867 CAATGGTCATACGAGATGGAATGGCGTGGGGATTGATGATAAGGTCCGGTACGATGCCCT 10808 Query 364485 CAGCGGTAAAGGGCATATCTTCGGGAGGAACGATGAGACCAATGGTTCCCTTTTGCGCAT 364544 ||| || ||||| ||||| | ||| ||||||||| ||||| || | | Sbjct 10807 GGCAGGTGAAAGGCATGTCTTCCATTCTATATGTGATACCAATGGTACCCTTCTGTCCGT 10748 Query 364545 AGCGAGAAGCAAACTTGTCGCCAAT 364569 |||||||| |||||||| ||||| Sbjct 10747 GACGAGAAGCGAACTTGTCACCAAT 10723 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884771711141857