Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20fructigenus_20[genbank_20GCA_5F001414455.1_202015-
10-27] 504 sequences; 61,124,938 total letters
Query= AAMG01000190.1
Length=117
Score E
Sequences producing significant alignments: (Bits) Value
seq192 203 2e-50
seq503 71.6 8e-11
>seq192
Length=9579
Score = 203 bits (224), Expect = 2e-50
Identities = 115/117 (98%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1610 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAAAGATAACATCGCCC 1669
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1670 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 1726
>seq503
Length=220590
Score = 71.6 bits (78), Expect = 8e-11
Identities = 45/49 (92%), Gaps = 0/49 (0%)
Strand=Plus/Plus
Query 58 CCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTG 106
|||||||||||||| ||||||||| |||||||||||| ||||||||||
Sbjct 178779 CCCGATCCCTAGTCCACATAGTTTATGGTTAAGACTACAACGGTATCTG 178827
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 278398684560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |