Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20fructigenus_20[genbank_20GCA_5F001414455.1_202015-
10-27] 504 sequences; 61,124,938 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq192 471 8e-131
seq503 205 2e-50
>seq192
Length=9579
Score = 471 bits (522), Expect = 8e-131
Identities = 293/314 (93%), Gaps = 0/314 (0%)
Strand=Plus/Minus
Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64
||||||| |||||||||||||||| |||| || |||||||||||||||||||| |||||
Sbjct 2041 TGGTCCGACCGGGCCTTTCCTTCTAGGGAACCCCATGCCCTTCACTGGGTGTGTGGGGGA 1982
Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124
| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1981 ACTAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTATGCTCGAATACAT 1922
Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 184
|||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1921 TAGCATGGAATAATGAAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 1862
Query 185 AATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 244
||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||
Sbjct 1861 AATGATTAATAGGGATAGTCGGGGGCATCAGTATTCCGTTGTCAGAGGTGAAATTCTTGG 1802
Query 245 ATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGA 304
||||| |||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct 1801 ATTTACGGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAGTGA 1742
Query 305 ACGAAAGTTAGGGG 318
||||||||||||||
Sbjct 1741 ACGAAAGTTAGGGG 1728
>seq503
Length=220590
Score = 205 bits (226), Expect = 2e-50
Identities = 168/202 (83%), Gaps = 3/202 (1%)
Strand=Plus/Minus
Query 119 ATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGAC 178
||||||| ||||||||||||| || || || | ||||||||| ||| ||||| ||||
Sbjct 179306 ATACATTGGCATGGAATAATAAAAACAGAAGTT-GATTCTATTTTATTGCTTTCTTGGAC 179248
Query 179 CGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAAT 238
||||||||||||||||||||||| ||||||| ||||||||| || |||||||||||||
Sbjct 179247 CGCCGTAATGATTAATAGGGATAATCGGGGGCATCAGTATTCTGTTATCAGAGGTGAAAT 179188
Query 239 TCTTGGATTTATTGAAGACTAACTACTGCGAAAGC--GTTCACCAAGGATGTTTTCATTA 296
|||| ||| | |||||| | ||||| ||||||| || ||| ||| | |||||||||
Sbjct 179187 TCTTAAATTCACAGAAGACAAGCTACTACGAAAGCATTTTTACCCAGGTTATTTTCATTA 179128
Query 297 ATCAGTGAACGAAAGTTAGGGG 318
|||||||||| |||||||||||
Sbjct 179127 ATCAGTGAACAAAAGTTAGGGG 179106
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915195387392
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |