Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20fructigenus_20[genbank_20GCA_5F001414455.1_202015- 10-27] 504 sequences; 61,124,938 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq192 801 0.0 seq154 208 3e-51 >seq192 Length=9579 Score = 801 bits (888), Expect = 0.0 Identities = 531/586 (91%), Gaps = 2/586 (0%) Strand=Plus/Minus Query 99 TATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGA 158 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 9579 TATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGA 9520 Query 159 AAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTGCCC 218 |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| Sbjct 9519 AAGAGAGTTAAACAGTACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTGCCT 9460 Query 219 GCAGTTGCTCAACC-GGCCCCTCGGCCGGTGCACTCTTCTGCGGTCAGGCCAGCATCAGC 277 || || | ||| || || ||| | ||||||||| | | ||||||||||||||| | Sbjct 9459 GCCGTCGATCATCCTGGGTTCTCC-CTGGTGCACTCGGCGGTGGTCAGGCCAGCATCGGT 9401 Query 278 TCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTATAGCCCGG 337 | || ||| ||||||||||| ||||| || || || |||||| |||||||||||| Sbjct 9400 TTCGGTGGTGGGATAAAGGCCTTGGGAACGTAGCTCCTCTCGGGGAGTGTTATAGCCCTC 9341 Query 338 GGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTAGGATGCTGGCGTAATGG 397 |||| ||||| ||| || |||| |||| ||||||| ||||||||||||||||||||||| Sbjct 9340 GGTGCAATGCCGCCTACCGGGACCGAGGACCGCGCTTCGGCTAGGATGCTGGCGTAATGG 9281 Query 398 TTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGG 457 ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 9280 TTGTAAGCGACCCGTCTTGAAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGG 9221 Query 458 GTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCA 517 |||| |||||| | |||||||| || ||||||||||||| |||||| | |||||||| || Sbjct 9220 GTGTTAAACCCATACGCGTAATTAACGTGAACGGAGGTGAGAACCCTTTAGGGTGCATCA 9161 Query 518 TCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAA 577 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 9160 TCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAA 9101 Query 578 AGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAG 637 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 9100 AGATGGTGAACTATGCCTAAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAG 9041 Query 638 CGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 9040 CGGTTCTGACGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 8995 Score = 331 bits (366), Expect = 4e-88 Identities = 194/201 (97%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82 ||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 203 TGTAAAGCTCTTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTATAT 144 Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 143 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 84 Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202 |||||||||||||||||||||||||||| || |||||||||||||||||||||||||||| Sbjct 83 TGAAAAGCACTTTGGAAAGAGAGTTAAACAGTACGTGAAATTGTTGAAAGGGAAGCGCTT 24 Query 203 GCAACCAGACTTGCCCGCAGT 223 ||||||||||||||| || || Sbjct 23 GCAACCAGACTTGCCTGCCGT 3 >seq154 Length=34377 Score = 208 bits (230), Expect = 3e-51 Identities = 121/125 (97%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 99 TATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGA 158 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 127 TATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGA 68 Query 159 AAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTGCCC 218 |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| Sbjct 67 AAGAGAGTTAAACAGTACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTGCCT 8 Query 219 GCAGT 223 || || Sbjct 7 GCCGT 3 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079989189200